Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30196 | Canola | cytosol | 98.53 | 98.53 |
| Bra040595.1-P | Field mustard | cytosol | 41.56 | 39.63 |
| Bra011134.1-P | Field mustard | mitochondrion | 62.1 | 36.65 |
| Bra025591.1-P | Field mustard | nucleus | 43.52 | 30.12 |
| Bra017007.1-P | Field mustard | nucleus | 42.3 | 29.67 |
| Bra040143.1-P | Field mustard | nucleus | 41.08 | 27.45 |
| Bra020274.1-P | Field mustard | nucleus | 39.61 | 25.88 |
| Bra033522.1-P | Field mustard | cytosol | 31.05 | 25.87 |
| Bra028463.1-P | Field mustard | cytosol | 31.78 | 24.25 |
| Bra025569.1-P | Field mustard | nucleus | 29.34 | 22.51 |
| KRG95394 | Soybean | nucleus | 29.83 | 21.52 |
| KRH67075 | Soybean | nucleus | 29.34 | 21.05 |
| Bra001113.1-P | Field mustard | cytosol | 17.6 | 15.62 |
| Bra036288.1-P | Field mustard | cytosol, nucleus, plasma membrane | 44.01 | 10.76 |
Protein Annotations
| EnsemblPlants:Bra024127.1 | EnsemblPlants:Bra024127.1-P | EnsemblPlantsGene:Bra024127 | Gene3D:3.30.40.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0046872 | InterPro:DC1 | InterPro:IPR013083 | InterPro:Znf_PHD | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR32410 |
| PFAM:PF03107 | SMART:SM00249 | SUPFAM:SSF57889 | UniParc:UPI0002540D3A | UniProt:M4E5S3 | MapMan:35.2 |
Description
AT4G02180 (E=2e-111) | DC1 domain-containing protein
Coordinates
chrA03:-:27429590..27430819
Molecular Weight (calculated)
47780.1 Da
IEP (calculated)
6.882
GRAVY (calculated)
-0.295
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRIVSFNCD ACGLAGDRSP YSCQQCDFMI HQSCIDLPEI INVNRHEHRL SRRLQLSPGS WICGFCHKKV DWSYGAYSCS ICPNYAIHSN CAIRDDVWDK
101: LELKGISEEL QEIKPFRVID ENLIHHFSHE EHYLQLNEEN ITCSGNIRCE ACVSPINYQA FYSCVQCDFL LHETCANLPR KKRHMYHDKP LALMVGDMME
201: FDCSACSQYS SGFRYNNKSF NIDVKCSTLS ESIFHESHGC TLYYIYGNNK ECIACGNRSY CTFYCDDCKF GLDPKCVVLP KTTKHWYDEH PLSLCYRVNT
301: KGEYWCDICE ESVEKYWFYK CDDCCVAFHT KCVLGDLSHL MPGRRIITYH DELRIEVMQT SPRFLPRCYY CRSRRAVPFV LKLFYPNQTV FACSSDCLLF
401: THQVCKFLY
101: LELKGISEEL QEIKPFRVID ENLIHHFSHE EHYLQLNEEN ITCSGNIRCE ACVSPINYQA FYSCVQCDFL LHETCANLPR KKRHMYHDKP LALMVGDMME
201: FDCSACSQYS SGFRYNNKSF NIDVKCSTLS ESIFHESHGC TLYYIYGNNK ECIACGNRSY CTFYCDDCKF GLDPKCVVLP KTTKHWYDEH PLSLCYRVNT
301: KGEYWCDICE ESVEKYWFYK CDDCCVAFHT KCVLGDLSHL MPGRRIITYH DELRIEVMQT SPRFLPRCYY CRSRRAVPFV LKLFYPNQTV FACSSDCLLF
401: THQVCKFLY
001: MDSDGVSVPL IHEHLMMPCN DLRRGDCCER LEAISDGYYC TTCDFFVHKK CGDEASECIE NPFHSNHPLR LGFLSRLQRQ HWLKVVRSCD LCGKNIGDLF
101: YRCEICDFDM DLHCAKYPPL EVIDIPEMHS HKLNLLKDRV EFDCDAKCGK IGYGFPYECH ECDSKFHVDC VRYSSSEEVK HPLEVNHSYH SLHPLKLLMG
201: QPPDYSDGKC RLCGRKIDDK LFYHCSSCNF TLDMRCVLNP PPKSVLDLKT HDHQLNLLPR LIFFTCNACG LNGDRSPYAC FQCDFLIHKD CFGLPRLINI
301: NRHDHRISRT SLIGIVNSVC GVCRQKVDWT CGGYSCQRCS TYIAHSKCAT REDVWNGKEL EGVPEEIEDI EPYVVIDDNT IQHFSHKEHY MRLNVNGLMC
401: EVNKRCNACN HPISPQSFYG CMDCDFILHQ NCAGFPRRKW HVLHNERLAL VTSEVNIFGC SACHKIFNGF RYEHEDTKLD VLCGSFSEPF IHPSHPHHPL
501: YCISPEDDEV CSGCNERSYH VLRCIEDNCG FILDFGCATF PQVVKHRIED QPLSLCYGEK ASGKYWCDIC EKETNPNTWF YTCKDHRASL HTWCVLGDFM
601: GLIPKSTIEL WNISYEVVLN NSISRPICRH CKSHCIPPII LKKIGTSDPY FCSLDCIESF KRLWRAK
101: YRCEICDFDM DLHCAKYPPL EVIDIPEMHS HKLNLLKDRV EFDCDAKCGK IGYGFPYECH ECDSKFHVDC VRYSSSEEVK HPLEVNHSYH SLHPLKLLMG
201: QPPDYSDGKC RLCGRKIDDK LFYHCSSCNF TLDMRCVLNP PPKSVLDLKT HDHQLNLLPR LIFFTCNACG LNGDRSPYAC FQCDFLIHKD CFGLPRLINI
301: NRHDHRISRT SLIGIVNSVC GVCRQKVDWT CGGYSCQRCS TYIAHSKCAT REDVWNGKEL EGVPEEIEDI EPYVVIDDNT IQHFSHKEHY MRLNVNGLMC
401: EVNKRCNACN HPISPQSFYG CMDCDFILHQ NCAGFPRRKW HVLHNERLAL VTSEVNIFGC SACHKIFNGF RYEHEDTKLD VLCGSFSEPF IHPSHPHHPL
501: YCISPEDDEV CSGCNERSYH VLRCIEDNCG FILDFGCATF PQVVKHRIED QPLSLCYGEK ASGKYWCDIC EKETNPNTWF YTCKDHRASL HTWCVLGDFM
601: GLIPKSTIEL WNISYEVVLN NSISRPICRH CKSHCIPPII LKKIGTSDPY FCSLDCIESF KRLWRAK
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZSJ1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.