Factsheet for Bra028463.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67463	Canola	cytosol	80.41	92.89
AT3G45840.1	Thale cress	mitochondrion, nucleus, peroxisome, vacuole	52.43	47.55
Bra001113.1-P	Field mustard	cytosol	34.14	39.7
Bra025591.1-P	Field mustard	nucleus	38.06	34.52
Bra033522.1-P	Field mustard	cytosol	31.34	34.22
Bra040595.1-P	Field mustard	cytosol	27.05	33.8
Bra017007.1-P	Field mustard	nucleus	36.75	33.79
Bra020274.1-P	Field mustard	nucleus	39.37	33.71
Bra024127.1-P	Field mustard	nucleus	24.25	31.78
Bra011134.1-P	Field mustard	mitochondrion	41.04	31.75
Bra040143.1-P	Field mustard	nucleus	33.4	29.25
Bra025569.1-P	Field mustard	nucleus	25.56	25.7
KRG95394	Soybean	nucleus	24.63	23.28
KRH67075	Soybean	nucleus	23.88	22.46
Bra036288.1-P	Field mustard	cytosol, nucleus, plasma membrane	39.18	12.55

Protein Annotations

Gene3D:3.30.60.20	MapMan:35.2	EnsemblPlantsGene:Bra028463	EnsemblPlants:Bra028463.1	EnsemblPlants:Bra028463.1-P	InterPro:DC1
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	GO:GO:0035556	InterPro:IPR002219	UniProt:M4EI48	InterPro:PE/DAG-bd	PFAM:PF03107
SMART:SM00109	SUPFAM:SSF57889	UniParc:UPI000254331B	:	:	:

Description

AT3G48400 (E=2e-149) | DC1 domain-containing protein

Coordinates

chrA02:+:498722..500332

Molecular Weight (calculated)

60253.3 Da

IEP (calculated)

5.993

GRAVY (calculated)

-0.266

Length

536 amino acids

Sequence
(BLAST)

001: MDASSTKLPI HEHPLASSAR FHGHCQGCGK SGNYYGGYLC NDPECRVVMF HKECAESPLE INHPSHPEHP LLLTQNPPRS KCDLCGKYLF VHDFPYFYHC
101: SICDFNVDTS CARKPPLPLH HPDPQEPPFF LIKENQSQKL CRVCEQPVCG KYHYGRPSCD EYVHLECVDV AEKVKHLPFH PDHPLEYTTS TYGEDQKSCI
201: LCGVTLEGVL YHCSTCDFSM CLGCVITPPP LVIEHPKTHE HQLTLSTRQI SFTCNVCGVP DNRSSYSCLP CGFTVHRSCI DMPQVIIINR HNHRLSYTNH
301: LGPGFSDCGV CRRPVDQLRG AYSCSICPTY AVHSKCATTI RVWDGINLEG IPEEIEDLPF KVVGDDNMMI NHFSHEEHNL RLTSENVISD ETTLCAACVY
401: PLNDSGPIYS CVECDYFLHE KCANLPMKIQ HVSYSGQFVL HASGGEGPEG DLFDCLVCDK TSTGFRYTYD VFNLDVHCSS VSEPFVYDGH LHPLYYEPEA
501: SITTCDTCQN TVFYHVLKCD VCEFSVDFSC ATLPKA

Best Arabidopsis Sequence Match ( AT3G48400.1 )
(BLAST)

001: MERSVDLPIH KHPLYHSSRF INGRCRGCKQ TSPIYSGYRC NDSDCNHVWY HKECGESLPE INHPSHLEHP LCLIDYRGSG TCAFCGAFLF GPTYHCWICA
101: FNIDIACARK QLPPLAAIEN PKCHNHSLVL LEKQVKKDHC GVCKKTVFGM YPYVCLECDV YFHVECINIS REVHHSSHTN HTLELFGSES LPDSAQKTCL
201: LCDDVSDHLI YHCSVCNFSI CVYCAINPPP LAIEHLKTHE HTLTLLPRQV KFICNACGMK GDGCPYFCLG CGYLIHRKCI DLPRVININR HDHRISLTHH
301: LGLQYSECGV CRQSVNGYYG GYSCSLCPNY VVHPQCAMKD DVWDGIELEG TPEDSEQDTA PFEVVDDNTI KHFSHEKHNL MLNKNGIITQ HDEITRCQAC
401: VLPLSSDPSY SCGQCDYVLH ETCANLPRKK RHVFNNKPFT LHTGGKDSSR NWFECDACRT ISNGFRYVSG DWILDVHCGS MSEPLLHDGH SHPLYYYRRQ
501: GKSCRSCHNK VVKPRVLCCD TCDFDLDFYC ANLPKTVKHC YDEHPLSLCH GEDDVIKDNK YWCDICETET DPKKWFYTCY DCGGGTLMSM DVSMKLFLTA
601: RVLDHSATNA ILDVKIASF

Arabidopsis Description

Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:F4JDY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.