Subcellular Localization
min:
: max
Winner_takes_all: vacuole, nucleus, peroxisome, mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- plastid 1
- peroxisome 2
- mitochondrion 1
- vacuole 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028463.1-P | Field mustard | cytosol | 47.55 | 52.43 |
| CDX67463 | Canola | cytosol | 37.56 | 47.84 |
| AT3G48400.1 | Thale cress | cytosol | 44.5 | 42.49 |
| AT4G01350.1 | Thale cress | cytosol | 46.7 | 42.33 |
| AT5G59940.1 | Thale cress | cytosol | 46.53 | 42.24 |
| AT5G22355.1 | Thale cress | cytosol | 47.38 | 42.17 |
| AT5G59930.1 | Thale cress | cytosol, nucleus, plasma membrane | 45.18 | 40.7 |
| AT5G59920.1 | Thale cress | cytosol | 47.55 | 39.58 |
| AT2G19660.2 | Thale cress | nucleus | 40.27 | 34.49 |
| AT4G11550.1 | Thale cress | cytosol | 38.92 | 34.43 |
| AT3G46800.1 | Thale cress | cytosol | 39.42 | 34.16 |
| AT3G46810.1 | Thale cress | cytosol | 39.59 | 34.11 |
| AT4G01910.1 | Thale cress | cytosol | 37.56 | 34.1 |
| AT4G11540.1 | Thale cress | cytosol | 30.12 | 33.9 |
| AT2G04680.1 | Thale cress | cytosol | 37.06 | 33.33 |
| AT5G40320.1 | Thale cress | nucleus | 33.5 | 33.33 |
| AT4G01930.1 | Thale cress | cytosol | 36.55 | 33.13 |
| AT5G37620.1 | Thale cress | cytosol | 36.55 | 33.13 |
| AT4G02190.1 | Thale cress | cytosol | 36.55 | 32.78 |
| AT3G27473.1 | Thale cress | cytosol | 36.38 | 32.48 |
| AT3G06990.1 | Thale cress | nucleus | 29.61 | 32.47 |
| AT2G43220.1 | Thale cress | peroxisome | 29.44 | 32.34 |
| AT2G19650.1 | Thale cress | cytosol | 37.06 | 32.11 |
| AT4G14980.1 | Thale cress | cytosol | 29.61 | 32.11 |
| AT4G01760.1 | Thale cress | cytosol | 36.21 | 32.08 |
| AT5G54050.1 | Thale cress | nucleus | 31.3 | 31.9 |
| AT3G27510.1 | Thale cress | cytosol | 23.69 | 31.82 |
| AT4G16015.1 | Thale cress | cytosol | 28.76 | 31.78 |
| AT3G28650.1 | Thale cress | cytosol | 35.7 | 31.73 |
| AT4G01920.1 | Thale cress | cytosol | 35.19 | 31.61 |
| AT5G44770.1 | Thale cress | cytosol, nucleus, peroxisome | 28.93 | 31.61 |
| AT4G01740.1 | Thale cress | cytosol | 34.69 | 31.44 |
| AT1G65180.1 | Thale cress | nucleus | 34.35 | 31.09 |
| AT3G43890.1 | Thale cress | cytosol | 34.69 | 31.01 |
| AT2G04500.1 | Thale cress | cytosol | 25.89 | 30.91 |
| AT5G45730.1 | Thale cress | nucleus | 29.27 | 30.89 |
| AT3G27480.1 | Thale cress | cytosol, nucleus, peroxisome | 31.13 | 30.46 |
| AT5G54020.2 | Thale cress | nucleus | 30.29 | 30.44 |
| AT3G45530.1 | Thale cress | cytosol | 35.53 | 30.35 |
| AT3G27500.1 | Thale cress | cytosol | 35.19 | 30.06 |
| AT3G07000.1 | Thale cress | cytosol | 28.93 | 29.79 |
| AT5G54040.1 | Thale cress | cytosol | 29.95 | 29.7 |
| AT3G27490.1 | Thale cress | cytosol | 34.18 | 29.62 |
| AT1G58037.1 | Thale cress | cytosol | 17.09 | 29.45 |
| AT5G54030.1 | Thale cress | cytosol | 20.81 | 29.36 |
| AT4G13992.1 | Thale cress | mitochondrion | 31.81 | 29.28 |
| AT5G42840.1 | Thale cress | cytosol | 33.16 | 29.21 |
| AT1G69150.1 | Thale cress | cytosol | 25.55 | 29.21 |
| AT4G11390.2 | Thale cress | cytosol | 26.4 | 28.57 |
| AT5G29624.1 | Thale cress | cytosol | 23.52 | 28.48 |
| AT4G01925.1 | Thale cress | cytosol | 13.03 | 27.5 |
| KRG95394 | Soybean | nucleus | 23.86 | 24.87 |
| KRH67075 | Soybean | nucleus | 23.18 | 24.04 |
| AT4G02180.1 | Thale cress | cytosol | 36.38 | 21.74 |
Protein Annotations
| MapMan:35.2 | EntrezGene:823727 | ProteinID:AEE78079.1 | ArrayExpress:AT3G45840 | EnsemblPlantsGene:AT3G45840 | RefSeq:AT3G45840 |
| TAIR:AT3G45840 | RefSeq:AT3G45840-TAIR-G | EnsemblPlants:AT3G45840.1 | TAIR:AT3G45840.1 | InterPro:DC1 | UniProt:F4J6S4 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | RefSeq:NP_190170.2 | PFAM:PF03107 | ScanProsite:PS01359 |
| PANTHER:PTHR32410 | SMART:SM00249 | SUPFAM:SSF57889 | UniParc:UPI00005DC218 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_PHD |
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:F4J6S4]
Coordinates
chr3:-:16847904..16849944
Molecular Weight (calculated)
67914.1 Da
IEP (calculated)
6.462
GRAVY (calculated)
-0.195
Length
591 amino acids
Sequence
(BLAST)
(BLAST)
001: MAILSIKLPI HIHPLSLSFR FHDRCEGCSF RNQGEYYGGY RCNDSDCNRV LFHKECAESP LEINHPSHPE HPLRLTERPP RYECDICGIH HLADVPYFYH
101: CSICDFNVDT SCARKPPPPP THDFQDLPFV FPKISGIYNC CGVCGHSVVA GKYYYSLPSR DQYAHLECIY HEKKVNLPFH PNHPLELTIS KSLPDDAEKA
201: CVLCGVRSEI VMYYCLICDF SMCLNCVRSP PPLTAKSLIY VFNVMLWSIE VVLAYRIESV SWGFICPKYV VHSQCATSYN VWDGIELEGI PEEAEDLPFK
301: VVGDNLINHF SHEKHNLRLT NEDIIYDESS RCEACIFPRN SGSIYCCDQC TFFLHEKCAH LPMKRRHLIY NRPFTLHARG KDLQIDWFSC DACGKQSTGF
401: RYISDDLMLD VHCSSVSEPF VHDGHVHPLY YKEEASTKCD SCHKLSYNML GCDVCDFSLD FCCANLPKTL KHKYDRHPLS LCYGEKASGK YCCDICETEM
501: DPSKWFYTCD DCVVTFHIDC VFGDFSRFIA GSIFETIIYT FEVVPTKDTT RQLCSQCHSR CKTPFILKAL SQTEDYCICS FKCLSSYFSK L
101: CSICDFNVDT SCARKPPPPP THDFQDLPFV FPKISGIYNC CGVCGHSVVA GKYYYSLPSR DQYAHLECIY HEKKVNLPFH PNHPLELTIS KSLPDDAEKA
201: CVLCGVRSEI VMYYCLICDF SMCLNCVRSP PPLTAKSLIY VFNVMLWSIE VVLAYRIESV SWGFICPKYV VHSQCATSYN VWDGIELEGI PEEAEDLPFK
301: VVGDNLINHF SHEKHNLRLT NEDIIYDESS RCEACIFPRN SGSIYCCDQC TFFLHEKCAH LPMKRRHLIY NRPFTLHARG KDLQIDWFSC DACGKQSTGF
401: RYISDDLMLD VHCSSVSEPF VHDGHVHPLY YKEEASTKCD SCHKLSYNML GCDVCDFSLD FCCANLPKTL KHKYDRHPLS LCYGEKASGK YCCDICETEM
501: DPSKWFYTCD DCVVTFHIDC VFGDFSRFIA GSIFETIIYT FEVVPTKDTT RQLCSQCHSR CKTPFILKAL SQTEDYCICS FKCLSSYFSK L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.