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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT2G04680.1 Thale cress cytosol 70.25 69.71
AT2G19660.2 Thale cress nucleus 61.66 58.26
AT2G19650.1 Thale cress cytosol 57.21 54.69
AT3G46810.1 Thale cress cytosol 54.91 52.19
AT3G46800.1 Thale cress cytosol 54.45 52.05
AT4G01925.1 Thale cress cytosol 19.63 45.71
AT5G22355.1 Thale cress cytosol 44.33 43.52
AT3G48400.1 Thale cress cytosol 40.49 42.65
AT1G58037.1 Thale cress cytosol 22.24 42.27
AT4G01910.1 Thale cress cytosol 41.26 41.32
AT2G43220.1 Thale cress peroxisome 34.05 41.26
AT4G01350.1 Thale cress cytosol 40.8 40.8
AT5G59940.1 Thale cress cytosol 40.49 40.55
AT4G11550.1 Thale cress cytosol 41.41 40.42
AT4G11540.1 Thale cress cytosol 32.52 40.38
AT4G16015.1 Thale cress cytosol 32.98 40.19
AT4G01920.1 Thale cress cytosol 40.49 40.12
AT4G01930.1 Thale cress cytosol 40.03 40.03
AT4G02190.1 Thale cress cytosol 40.18 39.76
AT4G01760.1 Thale cress cytosol 40.49 39.58
CDX82703 Canola cytosol 57.67 38.96
AT1G65180.1 Thale cress nucleus 38.96 38.9
AT3G27510.1 Thale cress cytosol 26.23 38.86
AT5G59930.1 Thale cress cytosol, nucleus, plasma membrane 38.8 38.57
AT4G01740.1 Thale cress cytosol 38.5 38.5
AT4G14980.1 Thale cress cytosol 31.9 38.17
AT3G07000.1 Thale cress cytosol 33.59 38.15
AT3G06990.1 Thale cress nucleus 31.44 38.03
AT4G13992.1 Thale cress mitochondrion 37.42 38.01
AT1G69150.1 Thale cress cytosol 30.06 37.91
AT5G59920.1 Thale cress cytosol 41.1 37.75
AT5G40320.1 Thale cress nucleus 34.36 37.71
AT5G44770.1 Thale cress cytosol, nucleus, peroxisome 31.14 37.52
AT3G27473.1 Thale cress cytosol 38.04 37.46
AT3G27480.1 Thale cress cytosol, nucleus, peroxisome 34.66 37.42
AT3G43890.1 Thale cress cytosol 37.88 37.37
AT3G28650.1 Thale cress cytosol 37.88 37.14
AT5G45730.1 Thale cress nucleus 31.9 37.14
AT5G54030.1 Thale cress cytosol 23.77 36.99
AT3G45840.1 Thale cress mitochondrion, nucleus, peroxisome, vacuole 33.13 36.55
AT3G27500.1 Thale cress cytosol 38.04 35.84
AT3G27490.1 Thale cress cytosol 37.42 35.78
AT2G04500.1 Thale cress cytosol 26.84 35.35
AT5G42840.1 Thale cress cytosol 36.35 35.32
AT3G45530.1 Thale cress cytosol 37.42 35.26
AT5G54050.1 Thale cress nucleus 30.98 34.83
AT5G54020.2 Thale cress nucleus 31.29 34.69
AT5G54040.1 Thale cress cytosol 30.67 33.56
AT4G11390.2 Thale cress cytosol 28.07 33.52
AT5G29624.1 Thale cress cytosol 24.69 32.99
AT4G02180.1 Thale cress cytosol 40.49 26.69
KRG95394 Soybean nucleus 23.16 26.63
KRH67075 Soybean nucleus 22.85 26.14
Protein Annotations
MapMan:35.2EntrezGene:833740ProteinID:AED94211.1ArrayExpress:AT5G37620EnsemblPlantsGene:AT5G37620RefSeq:AT5G37620
TAIR:AT5G37620RefSeq:AT5G37620-TAIR-GEnsemblPlants:AT5G37620.1TAIR:AT5G37620.1Unigene:At.65594ProteinID:BAB08308.1
InterPro:DC1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0009506GO:GO:0046872
RefSeq:NP_198578.1PFAM:PF03107PO:PO:0000084PO:PO:0009047UniProt:Q9FHQ8SMART:SM00249
SUPFAM:SSF57889UniParc:UPI00000A3335InterPro:Znf_PHDSEG:seg::
Description
CHP-rich zinc finger protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FHQ8]
Coordinates
chr5:-:14942396..14944354
Molecular Weight (calculated)
75138.2 Da
IEP (calculated)
7.431
GRAVY (calculated)
-0.341
Length
652 amino acids
Sequence
(BLAST)
001: MEKIELPIHK HPLLPITRFF SRHGCNGCGS DGYIYGGYHC NELGCETPAF HRECAESLQE IKHFSHPDHP LNLRLNDKAS TCNRCGIHLL RKTYIYVCSI
101: CDFKLDLHCA KDAAPLPILE NYNLHEHPLK LFDVSKSLKR VRLRECKTCD SPFLIEKLCY ICYQCKILFH ASCAEFFPEA NHTSHPQHPL KLLKFAEAPD
201: YADKKCLLCD EKFDQDQGLH HCDVCNFSIC RACMKNPPPV GVESPTTHEH QLHLVPRRIH FTCNACGTLG EQSPYFCLQC NFMIHRQCID LPRVININRH
301: DHRISYTRRI RHGKGICKVC RKMVDGFYGG YICVKCLSFA IHARCATRED VWEMVELEGT PEEDEIGPFE VIDDNTIKHF SHDHNLRINN DGDGQILHEN
401: IVCEACALQI LSEPFYSCKQ CNFKLHQKCA NHPRKKHHVY RNLPFTLLTS GNEIFQCWLC LQEFNGFMYQ SGHYVIDVRC AAISDTLEYK SHQHSLYYYS
501: TTYTHCSRCG KKDSVFRCDE CDYGLGGKCA ILPGKVMNNR YDDHPLFLSF DEMNVDGEYW CEACETKVNS KEWFYTCNDC GTTLHISCVV GDFSYIKHGS
601: HLMNTKVVSN TSICRPFCFV CNSRCKLPSI LKLSKGGVNV YICSFKCRLE TY
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.