Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G04680.1 | Thale cress | cytosol | 59.86 | 62.86 |
| AT5G37620.1 | Thale cress | cytosol | 58.26 | 61.66 |
| AT2G19650.1 | Thale cress | cytosol | 54.93 | 55.57 |
| AT3G46810.1 | Thale cress | cytosol | 53.91 | 54.23 |
| AT3G46800.1 | Thale cress | cytosol | 52.9 | 53.52 |
| AT4G01925.1 | Thale cress | cytosol | 19.13 | 47.14 |
| AT3G48400.1 | Thale cress | cytosol | 41.74 | 46.53 |
| AT5G22355.1 | Thale cress | cytosol | 43.62 | 45.33 |
| AT4G11550.1 | Thale cress | cytosol | 42.61 | 44.01 |
| AT5G59940.1 | Thale cress | cytosol | 41.3 | 43.78 |
| AT4G01910.1 | Thale cress | cytosol | 41.3 | 43.78 |
| AT1G58037.1 | Thale cress | cytosol | 21.74 | 43.73 |
| AT4G02190.1 | Thale cress | cytosol | 41.45 | 43.4 |
| AT4G01930.1 | Thale cress | cytosol | 40.87 | 43.25 |
| AT4G11540.1 | Thale cress | cytosol | 32.9 | 43.24 |
| AT4G14980.1 | Thale cress | cytosol | 33.91 | 42.94 |
| AT4G01760.1 | Thale cress | cytosol | 41.16 | 42.58 |
| AT4G01920.1 | Thale cress | cytosol | 40.58 | 42.55 |
| AT4G16015.1 | Thale cress | cytosol | 32.9 | 42.43 |
| AT4G01350.1 | Thale cress | cytosol | 40.0 | 42.33 |
| AT2G43220.1 | Thale cress | peroxisome | 32.9 | 42.19 |
| AT5G40320.1 | Thale cress | nucleus | 35.94 | 41.75 |
| AT1G65180.1 | Thale cress | nucleus | 39.42 | 41.65 |
| AT3G27510.1 | Thale cress | cytosol | 26.52 | 41.59 |
| AT5G54030.1 | Thale cress | cytosol | 25.07 | 41.29 |
| AT5G59930.1 | Thale cress | cytosol, nucleus, plasma membrane | 39.13 | 41.16 |
| AT4G01740.1 | Thale cress | cytosol | 38.41 | 40.64 |
| AT5G44770.1 | Thale cress | cytosol, nucleus, peroxisome | 31.59 | 40.3 |
| AT3G45840.1 | Thale cress | mitochondrion, nucleus, peroxisome, vacuole | 34.49 | 40.27 |
| AT5G45730.1 | Thale cress | nucleus | 32.61 | 40.18 |
| AT3G27480.1 | Thale cress | cytosol, nucleus, peroxisome | 35.07 | 40.07 |
| AT2G04500.1 | Thale cress | cytosol | 28.55 | 39.8 |
| AT1G69150.1 | Thale cress | cytosol | 29.71 | 39.65 |
| AT5G59920.1 | Thale cress | cytosol | 40.72 | 39.58 |
| AT3G07000.1 | Thale cress | cytosol | 32.9 | 39.55 |
| AT3G06990.1 | Thale cress | nucleus | 30.58 | 39.15 |
| AT4G13992.1 | Thale cress | mitochondrion | 36.23 | 38.94 |
| AT3G28650.1 | Thale cress | cytosol | 37.39 | 38.8 |
| AT5G54020.2 | Thale cress | nucleus | 33.04 | 38.78 |
| AT5G54050.1 | Thale cress | nucleus | 32.32 | 38.45 |
| AT3G43890.1 | Thale cress | cytosol | 36.81 | 38.43 |
| AT5G54040.1 | Thale cress | cytosol | 33.04 | 38.26 |
| AT3G27473.1 | Thale cress | cytosol | 36.09 | 37.61 |
| AT5G29624.1 | Thale cress | cytosol | 26.52 | 37.5 |
| AT3G27500.1 | Thale cress | cytosol | 37.1 | 36.99 |
| AT4G11390.2 | Thale cress | cytosol | 29.13 | 36.81 |
| AT3G27490.1 | Thale cress | cytosol | 36.09 | 36.51 |
| AT3G45530.1 | Thale cress | cytosol | 36.52 | 36.42 |
| AT5G42840.1 | Thale cress | cytosol | 35.22 | 36.21 |
| KRG95394 | Soybean | nucleus | 23.62 | 28.75 |
| KRH67075 | Soybean | nucleus | 23.62 | 28.6 |
| AT4G02180.1 | Thale cress | cytosol | 40.87 | 28.51 |
Protein Annotations
| MapMan:35.2 | EntrezGene:816485 | UniProt:A0A1P8AY40 | ProteinID:AEC06909.1 | ProteinID:ANM61584.1 | ArrayExpress:AT2G19660 |
| EnsemblPlantsGene:AT2G19660 | RefSeq:AT2G19660 | TAIR:AT2G19660 | RefSeq:AT2G19660-TAIR-G | EnsemblPlants:AT2G19660.2 | Unigene:At.39811 |
| EMBL:BT011675 | InterPro:DC1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0035556 | InterPro:IPR002219 | RefSeq:NP_001323792.1 |
| RefSeq:NP_179556.1 | InterPro:PE/DAG-bd | PFAM:PF03107 | SMART:SM00109 | SUPFAM:SSF57889 | UniParc:UPI0008485931 |
| SEG:seg | : | : | : | : | : |
Description
Cysteine/Histidine-rich C1 domain family protein [Source:TAIR;Acc:AT2G19660]
Coordinates
chr2:-:8496602..8498807
Molecular Weight (calculated)
78917.8 Da
IEP (calculated)
6.371
GRAVY (calculated)
-0.319
Length
690 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTLRDPIET KIEKKNITKE ICGLIWITME KVEVPPIHNH PLLPFTRFSY KACKGCGYVG YIYGGYHCNE LGCESVFHKE CADPLPEINH YSHPDHPLKL
101: LINVEPLASC SQCPSSFENG YLCSICDFKL DFRCATRLPL EFILEESTVH EHPIQLSDGT RDGFVQLCKT CKWGVFDAVH YKCNKCDLRF HVECTKLFPQ
201: ASHVLHPQHP LKLLRCEEAP DYADNKCLLC GNKFDGRIHH CDVCNFTICG GCMENPPPLS VVSPTTHEHQ LYLLSKPLGF TCNACGTQAD QSPYFCLQCN
301: FMIHWECIDL PRVININRHD HRISYTRRLG HGQNTCGVCR KKVDGFYGGY SCSKCSNYVV HSRCATDEDV WDMIELEGTP EEPEEDAPFE VIDDNTIKHF
401: SHDHNLVINK DGRILHESTL CKACVFQICS DAFYSCENCD FILHQKCANL PRKKRHVCDN LPFTLVTNDT SDETSCDLCW QSFTGFRYEC LTRMVTLDVR
501: CGSIREPLVH QSHQHPLYFS KRSSKSCTEC GKNMDLDIGS FSCDECDYSL DFKCALLPQK VKWHRYDDHP LYLSCGESSV DGEYWCEACE TKVNSKKWFY
601: TCNDCGVILH ISCVVGDFSY YMPGSKIGWE EDLVVSNTSM CRPFCYVCNS QCKLPSIVKV VSKADVVLYI CSLNCYYNFN RSNNYSSSDW
101: LINVEPLASC SQCPSSFENG YLCSICDFKL DFRCATRLPL EFILEESTVH EHPIQLSDGT RDGFVQLCKT CKWGVFDAVH YKCNKCDLRF HVECTKLFPQ
201: ASHVLHPQHP LKLLRCEEAP DYADNKCLLC GNKFDGRIHH CDVCNFTICG GCMENPPPLS VVSPTTHEHQ LYLLSKPLGF TCNACGTQAD QSPYFCLQCN
301: FMIHWECIDL PRVININRHD HRISYTRRLG HGQNTCGVCR KKVDGFYGGY SCSKCSNYVV HSRCATDEDV WDMIELEGTP EEPEEDAPFE VIDDNTIKHF
401: SHDHNLVINK DGRILHESTL CKACVFQICS DAFYSCENCD FILHQKCANL PRKKRHVCDN LPFTLVTNDT SDETSCDLCW QSFTGFRYEC LTRMVTLDVR
501: CGSIREPLVH QSHQHPLYFS KRSSKSCTEC GKNMDLDIGS FSCDECDYSL DFKCALLPQK VKWHRYDDHP LYLSCGESSV DGEYWCEACE TKVNSKKWFY
601: TCNDCGVILH ISCVVGDFSY YMPGSKIGWE EDLVVSNTSM CRPFCYVCNS QCKLPSIVKV VSKADVVLYI CSLNCYYNFN RSNNYSSSDW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.