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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G01925.1 Thale cress cytosol 31.75 73.93
AT4G01930.1 Thale cress cytosol 71.17 71.17
AT4G01910.1 Thale cress cytosol 68.86 68.97
AT4G01920.1 Thale cress cytosol 69.33 68.69
CDY69979 Canola nucleus 66.26 67.82
CDY52789 Canola cytosol 42.18 67.73
CDY52787 Canola nucleus 65.49 67.67
AT4G01760.1 Thale cress cytosol 66.56 65.07
AT4G02190.1 Thale cress cytosol 65.49 64.8
AT4G11540.1 Thale cress cytosol 51.84 64.38
CDY22036 Canola cytosol 58.13 63.59
AT4G11550.1 Thale cress cytosol 64.57 63.02
CDY65338 Canola cytosol 62.88 61.19
CDY21921 Canola plastid 35.12 60.26
CDY22034 Canola endoplasmic reticulum 57.36 59.46
AT4G11390.2 Thale cress cytosol 45.71 54.58
CDY50383 Canola cytosol 62.88 48.64
CDY22052 Canola nucleus 46.78 48.18
AT1G65180.1 Thale cress nucleus 47.09 47.01
CDY22035 Canola cytosol 62.58 46.05
AT4G02180.1 Thale cress cytosol 69.79 46.01
AT3G43890.1 Thale cress cytosol 45.86 45.23
AT1G69150.1 Thale cress cytosol 35.28 44.49
AT1G58037.1 Thale cress cytosol 23.31 44.31
AT5G22355.1 Thale cress cytosol 43.25 42.47
AT5G44770.1 Thale cress cytosol, nucleus, peroxisome 35.12 42.33
AT3G27510.1 Thale cress cytosol 28.53 42.27
AT4G14980.1 Thale cress cytosol 34.97 41.83
AT2G04500.1 Thale cress cytosol 31.75 41.82
AT3G06990.1 Thale cress nucleus 34.2 41.37
AT5G40320.1 Thale cress nucleus 37.58 41.25
AT3G27480.1 Thale cress cytosol, nucleus, peroxisome 38.04 41.06
AT5G45730.1 Thale cress nucleus 35.12 40.89
AT3G07000.1 Thale cress cytosol 35.89 40.77
AT3G27473.1 Thale cress cytosol 40.95 40.33
CDY50382 Canola cytosol 61.2 40.22
AT3G28650.1 Thale cress cytosol 40.95 40.15
AT5G54030.1 Thale cress cytosol 25.46 39.62
AT3G46800.1 Thale cress cytosol 41.41 39.59
AT4G16015.1 Thale cress cytosol 32.36 39.44
AT2G04680.1 Thale cress cytosol 39.57 39.27
AT4G01350.1 Thale cress cytosol 39.11 39.11
AT3G48400.1 Thale cress cytosol 37.12 39.1
AT5G59930.1 Thale cress cytosol, nucleus, plasma membrane 39.26 39.02
AT3G46810.1 Thale cress cytosol 40.95 38.92
AT5G54050.1 Thale cress nucleus 34.51 38.79
AT5G37620.1 Thale cress cytosol 38.5 38.5
AT2G43220.1 Thale cress peroxisome 31.75 38.48
AT3G45530.1 Thale cress cytosol 40.8 38.44
AT2G19660.2 Thale cress nucleus 40.64 38.41
AT3G27490.1 Thale cress cytosol 40.03 38.27
AT5G59940.1 Thale cress cytosol 38.19 38.25
AT4G13992.1 Thale cress mitochondrion 37.42 38.01
AT3G27500.1 Thale cress cytosol 40.03 37.72
AT5G54040.1 Thale cress cytosol 34.2 37.42
AT5G59920.1 Thale cress cytosol 40.64 37.32
AT5G42840.1 Thale cress cytosol 38.19 37.11
AT5G29624.1 Thale cress cytosol 27.76 37.09
AT5G54020.2 Thale cress nucleus 32.82 36.39
AT2G19650.1 Thale cress cytosol 38.04 36.36
AT3G45840.1 Thale cress mitochondrion, nucleus, peroxisome, vacuole 31.44 34.69
KRG95394 Soybean nucleus 24.85 28.57
KRH67075 Soybean nucleus 24.54 28.07
Bra036288.1-P Field mustard cytosol, nucleus, plasma membrane 65.03 25.34
Protein Annotations
MapMan:35.2EntrezGene:828012ProteinID:AAC72874.1ProteinID:AEE82072.1ArrayExpress:AT4G01740EnsemblPlantsGene:AT4G01740
RefSeq:AT4G01740TAIR:AT4G01740RefSeq:AT4G01740-TAIR-GEnsemblPlants:AT4G01740.1TAIR:AT4G01740.1Unigene:At.54088
ProteinID:CAB77744.1InterPro:DC1RefSeq:NP_192083.1PFAM:PF03107PO:PO:0000293PO:PO:0004507
PO:PO:0007611PO:PO:0009005PO:PO:0009009PO:PO:0009046PO:PO:0009047PO:PO:0020100
UniProt:Q9ZSI9SUPFAM:SSF57889UniParc:UPI00000A751B:::
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZSI9]
Coordinates
chr4:+:753422..755456
Molecular Weight (calculated)
74613.8 Da
IEP (calculated)
6.948
GRAVY (calculated)
-0.182
Length
652 amino acids
Sequence
(BLAST)
001: MDSEGVLMPL IHKHRMMPWN DLRRGDCCGR FESICDGYYC KICDIFVHKK CGESSEYIEH PSHPNHTLQL LSTRGNSHDC DLCGKNIGDL FYRCEICDFD
101: MDLYCAKYPP PEVINISKTH HHKLNLLKEL IQFDYCVWHP PEVNHTLEVN HSYHSLHPLK LHTGQLPNYS DRKCRLCAKE IEVGLFYHCS LCNFTLDMSC
201: VLNPPQRYLW NLKAHDHQLT LLPSLRSFLC SACGLNGDRS PYICVQCDFM IHQVCLHLPR VININRHDHR VSRTSVLGVV NSVCGVCRQK VDWTCGGFSC
301: PRCPGYAAHS LCATREDVWN GKELEGVPEE IEDIEPYVVI DDNTIQHFSH KEHYLRLHVN SVLCDDNKRC SACTHPICLQ SFYGCMDCDF ILHQNCAGFL
401: RMKWHVLHNE RLTLVTNETE VFKCYACERW SNGFRYQQGY KSFDVRCGSI SEPFFHPSHP DHPLYCILPY GKIFCNGCYK FKYGMLVCVE YECNHLICFN
501: CATLPPVVKH RVDDHPLSLC YGEKASGICW CDICEAKADP EIWFYTCKDQ RASLHTSCVL GDFSGLMPGS TLKSASNSSE VLLNNIVSRP FCSFLELMPG
601: STLESAGKSV EVGLNKSTSR PFCISCKLHC IFPIILKRLG TSDEYFCSIL CI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.