Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97701 | Canola | cytosol | 27.35 | 76.89 |
| CDY69979 | Canola | nucleus | 79.87 | 74.73 |
| CDY52787 | Canola | nucleus | 75.34 | 71.16 |
| CDY65338 | Canola | cytosol | 78.52 | 69.85 |
| CDY21921 | Canola | plastid | 42.79 | 67.11 |
| CDY52789 | Canola | cytosol | 44.46 | 65.27 |
| AT4G11540.1 | Thale cress | cytosol | 54.53 | 61.9 |
| AT4G01925.1 | Thale cress | cytosol | 28.86 | 61.43 |
| CDY22034 | Canola | endoplasmic reticulum | 64.26 | 60.89 |
| AT4G01930.1 | Thale cress | cytosol | 65.27 | 59.66 |
| AT4G01910.1 | Thale cress | cytosol | 65.1 | 59.6 |
| AT4G01920.1 | Thale cress | cytosol | 64.43 | 58.36 |
| AT4G01740.1 | Thale cress | cytosol | 63.59 | 58.13 |
| AT4G01760.1 | Thale cress | cytosol | 64.6 | 57.72 |
| AT4G02190.1 | Thale cress | cytosol | 63.26 | 57.21 |
| AT4G11550.1 | Thale cress | cytosol | 64.09 | 57.19 |
| CDY22035 | Canola | cytosol | 79.7 | 53.61 |
| AT4G11390.2 | Thale cress | cytosol | 48.15 | 52.56 |
| CDY50383 | Canola | cytosol | 73.32 | 51.84 |
| CDY22052 | Canola | nucleus | 51.68 | 48.66 |
| CDY52927 | Canola | cytosol | 28.19 | 44.56 |
| CDY50382 | Canola | cytosol | 72.32 | 43.45 |
| CDY30196 | Canola | cytosol | 29.7 | 43.28 |
| CDY41709 | Canola | peroxisome | 37.92 | 42.97 |
| CDY63456 | Canola | cytosol | 27.68 | 41.77 |
| CDY58516 | Canola | nucleus | 35.07 | 41.63 |
| CDY60784 | Canola | cytosol | 23.32 | 41.37 |
| CDY46706 | Canola | mitochondrion | 36.24 | 40.53 |
| CDY51540 | Canola | nucleus | 34.23 | 39.77 |
| CDY27940 | Canola | cytosol | 37.58 | 39.72 |
| CDY36839 | Canola | cytosol | 40.27 | 39.67 |
| AT4G02180.1 | Thale cress | cytosol | 65.27 | 39.33 |
| CDY28703 | Canola | cytosol | 32.55 | 38.96 |
| CDX93183 | Canola | cytosol | 43.29 | 38.74 |
| CDY48718 | Canola | cytosol | 23.83 | 38.27 |
| CDY63290 | Canola | cytosol | 31.88 | 37.85 |
| CDY29992 | Canola | cytosol | 16.44 | 37.4 |
| CDY06776 | Canola | cytosol | 17.45 | 36.49 |
| CDY09238 | Canola | cytosol | 28.69 | 36.0 |
| CDY09240 | Canola | cytosol | 28.52 | 35.79 |
| CDY44574 | Canola | cytosol | 28.69 | 35.48 |
| CDX67463 | Canola | cytosol | 27.52 | 35.34 |
| CDY63460 | Canola | cytosol, mitochondrion | 24.66 | 35.34 |
| CDY27938 | Canola | cytosol | 26.01 | 35.31 |
| CDY64703 | Canola | cytosol | 39.26 | 35.24 |
| CDY30007 | Canola | cytosol, nucleus, plastid | 39.09 | 35.04 |
| CDY44167 | Canola | cytosol | 27.85 | 33.74 |
| CDY29993 | Canola | cytosol | 34.9 | 33.71 |
| CDY21132 | Canola | cytosol | 34.4 | 33.5 |
| CDY22883 | Canola | cytosol | 36.24 | 33.08 |
| CDX88733 | Canola | cytosol | 34.4 | 32.85 |
| CDX74184 | Canola | plasma membrane | 22.48 | 32.68 |
| CDX71062 | Canola | cytosol | 34.23 | 32.59 |
| CDX74183 | Canola | cytosol | 18.12 | 31.4 |
| CDY43524 | Canola | cytosol | 26.51 | 31.23 |
| CDY40661 | Canola | cytosol | 39.43 | 30.84 |
| CDY42579 | Canola | nucleus | 13.76 | 29.93 |
| KRG95394 | Soybean | nucleus | 27.35 | 28.75 |
| CDY36353 | Canola | plastid | 14.93 | 28.53 |
| KRH67075 | Soybean | nucleus | 26.68 | 27.89 |
| CDX82703 | Canola | cytosol | 40.6 | 25.08 |
Protein Annotations
| EnsemblPlants:CDY22036 | EnsemblPlantsGene:GSBRNA2T00018407001 | GO:A0A078G9I5 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0046872 | GO:GO:0047134 | InterPro:DC1 | InterPro:Znf_PHD | PFAM:PF03107 | ProteinID:CDY22036 |
| ProteinID:CDY22036.1 | SEG:seg | SMART:SM00249 | SUPFAM:SSF57889 | UniParc:UPI0004EE8F1D | UniProt:A0A078G9I5 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA09g00650DBnaA09g00650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9I5]
Coordinates
chrLK032127:+:226847..228832
Molecular Weight (calculated)
68812.5 Da
IEP (calculated)
6.791
GRAVY (calculated)
-0.360
Length
596 amino acids
Sequence
(BLAST)
(BLAST)
001: MESEGVLLPL IHEHPMMPWN DLRRGDCCGR YVSQSDGYYC KLCDFFLHKE CGELTEFIID HPAHPDHTLR LQGIRGHVCD ICERKIKNLC YRCCDVCQFD
101: LDLHCAKYPP PDVIDNFETH SHKLTLVKKN TVFDSKLLTR EIGELFYHCS SCNFTVGFHC VLNPPQKSLV DPKVHDHQLT LLPRLDSFTC NACGLKGDRS
201: PYACFDCGFM IHQDCLGLPR VININRHDHR VSRTSVLGDA AMNSVCGVCR KKVDWTCGGF SCKRCPGYVV HSKCATRDDV WNGEELEGVH EEEEDTEPYV
301: VIDDNTIRHF SHEEHNLRRI HGNGIMYEEQ KRCKACTHPI GLKSFYGCID CDFYLHQKCA ECPKTKRHVL HNDRLTLVTN EELADFLCKG CDLKYNGFMY
401: KHGDIELDVL CGSISEPFVH PSHPHHPLYY MPTEDREICN GCNRKELRVL RCIEIDCVFV LDFKCATLPQ VVKHRVDDHP LSLCYGEEEE ASGKYWCDIC
501: ERETNPKEWF YTCKDQRASL HTKCVLGDLA RFMPRSVVKF QNRSFEVVLN KSVTRPFCSK CKSRCIYPII LKLLGISETS FCSFECAVLF YWFGEK
101: LDLHCAKYPP PDVIDNFETH SHKLTLVKKN TVFDSKLLTR EIGELFYHCS SCNFTVGFHC VLNPPQKSLV DPKVHDHQLT LLPRLDSFTC NACGLKGDRS
201: PYACFDCGFM IHQDCLGLPR VININRHDHR VSRTSVLGDA AMNSVCGVCR KKVDWTCGGF SCKRCPGYVV HSKCATRDDV WNGEELEGVH EEEEDTEPYV
301: VIDDNTIRHF SHEEHNLRRI HGNGIMYEEQ KRCKACTHPI GLKSFYGCID CDFYLHQKCA ECPKTKRHVL HNDRLTLVTN EELADFLCKG CDLKYNGFMY
401: KHGDIELDVL CGSISEPFVH PSHPHHPLYY MPTEDREICN GCNRKELRVL RCIEIDCVFV LDFKCATLPQ VVKHRVDDHP LSLCYGEEEE ASGKYWCDIC
501: ERETNPKEWF YTCKDQRASL HTKCVLGDLA RFMPRSVVKF QNRSFEVVLN KSVTRPFCSK CKSRCIYPII LKLLGISETS FCSFECAVLF YWFGEK
001: MDSEGVLMPL IHKHRMMPWN DLRRGDCCGR FESICDGYYC KICDIFVHKK CGESSEYIEH PSHPNHTLQL LSTRGNSHDC DLCGKNIGDL FYRCEICDFD
101: MDLYCAKYPP PEVINISKTH HHKLNLLKEL IQFDYCVWHP PEVNHTLEVN HSYHSLHPLK LHTGQLPNYS DRKCRLCAKE IEVGLFYHCS LCNFTLDMSC
201: VLNPPQRYLW NLKAHDHQLT LLPSLRSFLC SACGLNGDRS PYICVQCDFM IHQVCLHLPR VININRHDHR VSRTSVLGVV NSVCGVCRQK VDWTCGGFSC
301: PRCPGYAAHS LCATREDVWN GKELEGVPEE IEDIEPYVVI DDNTIQHFSH KEHYLRLHVN SVLCDDNKRC SACTHPICLQ SFYGCMDCDF ILHQNCAGFL
401: RMKWHVLHNE RLTLVTNETE VFKCYACERW SNGFRYQQGY KSFDVRCGSI SEPFFHPSHP DHPLYCILPY GKIFCNGCYK FKYGMLVCVE YECNHLICFN
501: CATLPPVVKH RVDDHPLSLC YGEKASGICW CDICEAKADP EIWFYTCKDQ RASLHTSCVL GDFSGLMPGS TLKSASNSSE VLLNNIVSRP FCSFLELMPG
601: STLESAGKSV EVGLNKSTSR PFCISCKLHC IFPIILKRLG TSDEYFCSIL CI
101: MDLYCAKYPP PEVINISKTH HHKLNLLKEL IQFDYCVWHP PEVNHTLEVN HSYHSLHPLK LHTGQLPNYS DRKCRLCAKE IEVGLFYHCS LCNFTLDMSC
201: VLNPPQRYLW NLKAHDHQLT LLPSLRSFLC SACGLNGDRS PYICVQCDFM IHQVCLHLPR VININRHDHR VSRTSVLGVV NSVCGVCRQK VDWTCGGFSC
301: PRCPGYAAHS LCATREDVWN GKELEGVPEE IEDIEPYVVI DDNTIQHFSH KEHYLRLHVN SVLCDDNKRC SACTHPICLQ SFYGCMDCDF ILHQNCAGFL
401: RMKWHVLHNE RLTLVTNETE VFKCYACERW SNGFRYQQGY KSFDVRCGSI SEPFFHPSHP DHPLYCILPY GKIFCNGCYK FKYGMLVCVE YECNHLICFN
501: CATLPPVVKH RVDDHPLSLC YGEKASGICW CDICEAKADP EIWFYTCKDQ RASLHTSCVL GDFSGLMPGS TLKSASNSSE VLLNNIVSRP FCSFLELMPG
601: STLESAGKSV EVGLNKSTSR PFCISCKLHC IFPIILKRLG TSDEYFCSIL CI
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZSI9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.