Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71062 | Canola | cytosol | 93.59 | 93.29 |
| CDX74184 | Canola | plasma membrane | 33.33 | 50.73 |
| CDY09238 | Canola | cytosol | 38.46 | 50.53 |
| CDY09240 | Canola | cytosol | 38.46 | 50.53 |
| CDY30007 | Canola | cytosol, nucleus, plastid | 52.4 | 49.17 |
| CDY64703 | Canola | cytosol | 51.76 | 48.64 |
| CDX74183 | Canola | cytosol | 26.6 | 48.26 |
| CDX67463 | Canola | cytosol | 32.05 | 43.1 |
| CDY52927 | Canola | cytosol | 25.96 | 42.97 |
| CDY48718 | Canola | cytosol | 25.0 | 42.05 |
| CDY41709 | Canola | peroxisome | 33.81 | 40.11 |
| CDY06776 | Canola | cytosol | 18.27 | 40.0 |
| CDY40661 | Canola | cytosol | 48.56 | 39.76 |
| CDY63290 | Canola | cytosol | 31.89 | 39.64 |
| CDY63460 | Canola | cytosol, mitochondrion | 25.48 | 38.22 |
| CDY28703 | Canola | cytosol | 29.65 | 37.15 |
| CDY51540 | Canola | nucleus | 30.45 | 37.04 |
| CDY29992 | Canola | cytosol | 15.38 | 36.64 |
| CDY52789 | Canola | cytosol | 23.72 | 36.45 |
| CDX93183 | Canola | cytosol | 38.78 | 36.34 |
| CDY46706 | Canola | mitochondrion | 30.93 | 36.21 |
| CDY69979 | Canola | nucleus | 36.86 | 36.11 |
| CDY52787 | Canola | nucleus | 36.06 | 35.66 |
| CDY30196 | Canola | cytosol | 23.24 | 35.45 |
| CDY63456 | Canola | cytosol | 22.28 | 35.19 |
| CDY27940 | Canola | cytosol | 31.57 | 34.93 |
| CDX97701 | Canola | cytosol | 11.86 | 34.91 |
| CDY22034 | Canola | endoplasmic reticulum | 35.1 | 34.82 |
| CDY21921 | Canola | plastid | 21.15 | 34.74 |
| CDY65338 | Canola | cytosol | 37.02 | 34.48 |
| CDY22036 | Canola | cytosol | 32.85 | 34.4 |
| CDY58516 | Canola | nucleus | 27.4 | 34.06 |
| CDY43524 | Canola | cytosol | 27.24 | 33.6 |
| CDY60784 | Canola | cytosol | 17.95 | 33.33 |
| CDY22883 | Canola | cytosol | 34.62 | 33.08 |
| CDY36839 | Canola | cytosol | 31.57 | 32.56 |
| CDY44167 | Canola | cytosol | 25.48 | 32.32 |
| CDY42579 | Canola | nucleus | 13.62 | 31.02 |
| CDY27938 | Canola | cytosol | 21.79 | 30.98 |
| CDY36353 | Canola | plastid | 15.22 | 30.45 |
| CDY29993 | Canola | cytosol | 29.17 | 29.5 |
| CDY21132 | Canola | cytosol | 28.85 | 29.41 |
| CDY44574 | Canola | cytosol | 22.28 | 28.84 |
| CDY22052 | Canola | nucleus | 28.85 | 28.44 |
| CDY50383 | Canola | cytosol | 37.34 | 27.64 |
| KRG95394 | Soybean | nucleus | 23.72 | 26.1 |
| KRH67075 | Soybean | nucleus | 23.08 | 25.26 |
| CDY22035 | Canola | cytosol | 35.26 | 24.83 |
| CDX82703 | Canola | cytosol | 36.54 | 23.63 |
| CDY50382 | Canola | cytosol | 36.06 | 22.68 |
Protein Annotations
| EnsemblPlants:CDX88733 | EnsemblPlantsGene:GSBRNA2T00148786001 | GO:A0A078DND6 | InterPro:DC1 | InterPro:Znf_PHD | PFAM:PF03107 |
| ProteinID:CDX88733 | ProteinID:CDX88733.1 | SEG:seg | SMART:SM00249 | SUPFAM:SSF57889 | UniParc:UPI0004EF13B8 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA03g09160D
Coordinates
chrLK031856:+:712652..714838
Molecular Weight (calculated)
71481.3 Da
IEP (calculated)
7.348
GRAVY (calculated)
-0.241
Length
624 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRITSTTMY KTSFHDHPLF PSPRFVISYC QGCKTKGTIY GGYYCNDPNC SAWFFHKKCA EAPLQINQHP SHPQHLLLLR KKLGVGVCEL CGESKRTPFY
101: SCSTCEFKVN LTCGMKPPPS AIEHPLCHDH PLVLLKKGKE KFPCEVCKET FGGPSYLCHE CNLYFHLDCV ILSKEVNHPC HSNHPIKLFA PENLMGDAEK
201: ICFSCEKQSE NMLYHCPTCN FSICLVCTRN PPPLVIEHTR THVHPLTLLS KNMSFTCDVC GEDGKGGPYV CLQCAFLTHG ECIDLPRIIS INRHEHRISF
301: TPHLGAGYSK CGVCRKSLNQ YHGAYSCSVC PKYATHCKCA SRSDLWDRVD LEGIPNHDAE PFKMVGDDLI IHFSHEKHPL KFYKKNKILY DKWLQCEACM
401: YPLAFESIYG CEECRFFLHD KCVNLPRKKK IAFSRVPHSL EVTNQVVTAC RECRVLFDGF NYTFHGDWRV DVHCGSLCEP FIHDGHLHPL YIYKRWGSSC
501: CVACEDIVHG GYMMCCDACG FDLCLYCASL PIKMWHKNDD HPITLHCGVK LSEKSCCEIC ERELDQCKWF YTCFDCGVTF HTRCVLGDFS RLKPEKLIFY
601: EWNRFEVIEE GGQLNSLIYE SMNA
101: SCSTCEFKVN LTCGMKPPPS AIEHPLCHDH PLVLLKKGKE KFPCEVCKET FGGPSYLCHE CNLYFHLDCV ILSKEVNHPC HSNHPIKLFA PENLMGDAEK
201: ICFSCEKQSE NMLYHCPTCN FSICLVCTRN PPPLVIEHTR THVHPLTLLS KNMSFTCDVC GEDGKGGPYV CLQCAFLTHG ECIDLPRIIS INRHEHRISF
301: TPHLGAGYSK CGVCRKSLNQ YHGAYSCSVC PKYATHCKCA SRSDLWDRVD LEGIPNHDAE PFKMVGDDLI IHFSHEKHPL KFYKKNKILY DKWLQCEACM
401: YPLAFESIYG CEECRFFLHD KCVNLPRKKK IAFSRVPHSL EVTNQVVTAC RECRVLFDGF NYTFHGDWRV DVHCGSLCEP FIHDGHLHPL YIYKRWGSSC
501: CVACEDIVHG GYMMCCDACG FDLCLYCASL PIKMWHKNDD HPITLHCGVK LSEKSCCEIC ERELDQCKWF YTCFDCGVTF HTRCVLGDFS RLKPEKLIFY
601: EWNRFEVIEE GGQLNSLIYE SMNA
001: MATEAVDLPI HEHPLFPSAR CIDDECDGCH VNGFMYAGYF CNEPYCYVWF HKDCAEAPGE ISHSSHPEHP LLLTNDSKDG PCDLCGQKLL TPCYSCPTCE
101: FKVDLTCGMK PSPPAIEHPL CHDHAVVFLK IREEKVPCEL CKESIEGPSY SCLECDMYFH VNCVHLSEEV NHPCHSIHPL KLITSESLTD DAEKSCLLCG
201: NIPAENMLYH CSVCNFTSCL GCTKNPPLLV IEHMKTHKHP LTLLPRRISC ICDVCGKKCQ FTAYVCLQCD FVTARKCIDR PRVININRHD HRIYLTHHLG
301: TGYSECGVCH KNVSQYKGAY SCSVCPNYAV HSTCAVRTDV WDGVELEGTT EITEDISPFK VVGDNLICHF SHEEHQLKLH KEDVIHDERR RCEACIHPVQ
401: FGSIYVCEEE ECCFVLHEKC ANLPMKKRLV FGTRPYTLMK ETTEITHCEL CGILSDGFAY SSHEWSDVDV HCGSLNEPLV HDGHIHPLYF AKKEEHTCDG
501: CQKSIEDYML RCKACDFDLC LYCATLPEKI WHRNDGHPLT LCCGEKEEAS GKYWCDICEK ELDPSIWFYT CYDCGVTLHA QCVLGDFSRL VLGQIYSFGE
601: KEIEFEAVPN NINTRPFCIQ CNSRCKVSVI LKILKDSEDG SDDGSDDVSD DVSDDPSNDV SDDTSDDDSD VVSDVVSDDA SNDDSDDTSD DHNGYICSRS
701: CLSSYLGEEI
101: FKVDLTCGMK PSPPAIEHPL CHDHAVVFLK IREEKVPCEL CKESIEGPSY SCLECDMYFH VNCVHLSEEV NHPCHSIHPL KLITSESLTD DAEKSCLLCG
201: NIPAENMLYH CSVCNFTSCL GCTKNPPLLV IEHMKTHKHP LTLLPRRISC ICDVCGKKCQ FTAYVCLQCD FVTARKCIDR PRVININRHD HRIYLTHHLG
301: TGYSECGVCH KNVSQYKGAY SCSVCPNYAV HSTCAVRTDV WDGVELEGTT EITEDISPFK VVGDNLICHF SHEEHQLKLH KEDVIHDERR RCEACIHPVQ
401: FGSIYVCEEE ECCFVLHEKC ANLPMKKRLV FGTRPYTLMK ETTEITHCEL CGILSDGFAY SSHEWSDVDV HCGSLNEPLV HDGHIHPLYF AKKEEHTCDG
501: CQKSIEDYML RCKACDFDLC LYCATLPEKI WHRNDGHPLT LCCGEKEEAS GKYWCDICEK ELDPSIWFYT CYDCGVTLHA QCVLGDFSRL VLGQIYSFGE
601: KEIEFEAVPN NINTRPFCIQ CNSRCKVSVI LKILKDSEDG SDDGSDDVSD DVSDDPSNDV SDDTSDDDSD VVSDVVSDDA SNDDSDDTSD DHNGYICSRS
701: CLSSYLGEEI
Arabidopsis Description
ULI3Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q8W2D2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.