Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G16015.1 | Thale cress | cytosol | 63.39 | 39.81 |
| CDY44167 | Canola | cytosol | 51.19 | 34.96 |
| AT4G13992.1 | Thale cress | mitochondrion | 64.58 | 33.8 |
| CDY30196 | Canola | cytosol | 37.8 | 31.05 |
| CDY22883 | Canola | cytosol | 56.85 | 29.25 |
| CDY58516 | Canola | nucleus | 38.69 | 25.9 |
| CDY63456 | Canola | cytosol | 30.06 | 25.57 |
| CDY27938 | Canola | cytosol | 32.44 | 24.83 |
| CDY41709 | Canola | peroxisome | 37.5 | 23.95 |
| CDY44574 | Canola | cytosol | 33.93 | 23.65 |
| CDY63290 | Canola | cytosol | 35.12 | 23.51 |
| CDY22036 | Canola | cytosol | 41.37 | 23.32 |
| CDY46706 | Canola | mitochondrion | 36.9 | 23.26 |
| CDY21921 | Canola | plastid | 26.19 | 23.16 |
| CDY28703 | Canola | cytosol | 34.23 | 23.09 |
| CDY27940 | Canola | cytosol | 37.8 | 22.52 |
| CDY21132 | Canola | cytosol | 40.48 | 22.22 |
| CDY51540 | Canola | nucleus | 33.63 | 22.03 |
| CDY29993 | Canola | cytosol | 40.18 | 21.88 |
| CDY69979 | Canola | nucleus | 41.37 | 21.82 |
| CDY52787 | Canola | nucleus | 40.48 | 21.55 |
| CDY36839 | Canola | cytosol | 38.69 | 21.49 |
| CDY36353 | Canola | plastid | 19.05 | 20.51 |
| CDX97701 | Canola | cytosol | 12.8 | 20.28 |
| CDY65338 | Canola | cytosol | 39.88 | 20.0 |
| CDX93183 | Canola | cytosol | 39.29 | 19.82 |
| CDY30007 | Canola | cytosol, nucleus, plastid | 37.5 | 18.95 |
| CDY64703 | Canola | cytosol | 37.2 | 18.83 |
| CDX88733 | Canola | cytosol | 33.33 | 17.95 |
| CDX71062 | Canola | cytosol | 32.74 | 17.57 |
| CDY09240 | Canola | cytosol | 23.21 | 16.42 |
| CDY22034 | Canola | endoplasmic reticulum | 30.36 | 16.22 |
| CDY09238 | Canola | cytosol | 22.92 | 16.21 |
| KRH67075 | Soybean | nucleus | 26.79 | 15.79 |
| KRG95394 | Soybean | nucleus | 26.49 | 15.7 |
| CDY40661 | Canola | cytosol | 35.42 | 15.62 |
| CDY50383 | Canola | cytosol | 38.69 | 15.42 |
| CDY22035 | Canola | cytosol | 39.29 | 14.9 |
| CDY52927 | Canola | cytosol | 14.88 | 13.26 |
| CDX82703 | Canola | cytosol | 37.5 | 13.06 |
| CDY50382 | Canola | cytosol | 38.1 | 12.9 |
| CDY43524 | Canola | cytosol | 19.05 | 12.65 |
| CDX67463 | Canola | cytosol | 16.67 | 12.07 |
| CDX74183 | Canola | cytosol | 12.2 | 11.92 |
| CDY06776 | Canola | cytosol | 9.82 | 11.58 |
| CDY48718 | Canola | cytosol | 12.5 | 11.32 |
| CDY52789 | Canola | cytosol | 12.8 | 10.59 |
| CDY22052 | Canola | nucleus | 18.45 | 9.79 |
| CDY29992 | Canola | cytosol | 7.14 | 9.16 |
| CDX74184 | Canola | plasma membrane | 10.12 | 8.29 |
| CDY63460 | Canola | cytosol, mitochondrion | 9.52 | 7.69 |
| CDY42579 | Canola | nucleus | 6.25 | 7.66 |
Protein Annotations
| EnsemblPlants:CDY60784 | EnsemblPlantsGene:GSBRNA2T00030078001 | GO:A0A078J767 | InterPro:DC1 | PANTHER:PTHR32410 | PFAM:PF03107 |
| ProteinID:CDY60784 | ProteinID:CDY60784.1 | SUPFAM:SSF57889 | UniParc:UPI0004EEF575 | UniProt:A0A078J767 | MapMan:35.2 |
Description
BnaCnng36900DBnaCnng36900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J767]
Coordinates
chrLK033915:+:5716..11665
Molecular Weight (calculated)
38678.4 Da
IEP (calculated)
6.539
GRAVY (calculated)
-0.208
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEINWTCGA YSCSKCPDFA IHVRCATRFG IWDGIELESI LEDTTNSKAY EVIEEGVIKH FIHKNHTLKL KEGSDANGKS RRCTICAYPI FSTLFYDCMV
101: CDYFIIHQKC ADLPKKKIDS FYKMSMTLVS NSCELNLCDA CQNYFEGFMY ISDNGIINLD VRCGSISEPF VHEGHPHHSL YINYSTKDKL CNACGDKACM
201: VFSCEECKFV LDVKCSILPK LVEHKNDKDH FLTLCYGEKT REQYWCEVCE EDLNPEKWFY SCDHCGVTLH IKCTFGDFIW INPGGEAESI YMVIPNNYTS
301: RPVCNGCDSR CQYPFILKYK KYILCSLQCF KSVVGR
101: CDYFIIHQKC ADLPKKKIDS FYKMSMTLVS NSCELNLCDA CQNYFEGFMY ISDNGIINLD VRCGSISEPF VHEGHPHHSL YINYSTKDKL CNACGDKACM
201: VFSCEECKFV LDVKCSILPK LVEHKNDKDH FLTLCYGEKT REQYWCEVCE EDLNPEKWFY SCDHCGVTLH IKCTFGDFIW INPGGEAESI YMVIPNNYTS
301: RPVCNGCDSR CQYPFILKYK KYILCSLQCF KSVVGR
001: MEIIEGPKAH EHPLFLLPKM TMFTCHLCGL QDDRFPYACN LCNLSFHKDC AESTPEMKYS CHPKHILKRL TRVPSVDINC AKNPLPSTIV HLKAHEHLLT
101: LMPQRNFVCD ACGMDDDPNP YVCLPCNFMI HQNCIDKPSI IKIYRHDHRL YYNHCLDAGD WKCGVCNKEI NWTCGAYSCS KCPDFAIHPR CVKRFGIWDG
201: IELEGIPENN VEVKSYEVIE EGEIRHFSHE KHNLKLQEES DANNECMLCK ACNYPIYSNS FYSCMECDDF ILHKKCADLP KKKIDPFYNM LTTLITNDIR
301: ISICNACQNV SQGFTYVSDD HKIILDVRCG SISEPFVHES HPLHSLYISR STEEKFCIAC GDKATMVLSC EECDFILDIK CSNLPKMVKH KNDKDHLLSL
401: CYGEKTSEQY WCEICEEALN AKKWFYSCDD CDITFHIKCT LGDFVGMYQE AKDESFQTYM ILNNHINRPV CCCCESRCQF SSILRFYGKL ICSLQCLQKK
501: FQELHDDIS
101: LMPQRNFVCD ACGMDDDPNP YVCLPCNFMI HQNCIDKPSI IKIYRHDHRL YYNHCLDAGD WKCGVCNKEI NWTCGAYSCS KCPDFAIHPR CVKRFGIWDG
201: IELEGIPENN VEVKSYEVIE EGEIRHFSHE KHNLKLQEES DANNECMLCK ACNYPIYSNS FYSCMECDDF ILHKKCADLP KKKIDPFYNM LTTLITNDIR
301: ISICNACQNV SQGFTYVSDD HKIILDVRCG SISEPFVHES HPLHSLYISR STEEKFCIAC GDKATMVLSC EECDFILDIK CSNLPKMVKH KNDKDHLLSL
401: CYGEKTSEQY WCEICEEALN AKKWFYSCDD CDITFHIKCT LGDFVGMYQE AKDESFQTYM ILNNHINRPV CCCCESRCQF SSILRFYGKL ICSLQCLQKK
501: FQELHDDIS
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:F4JKZ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.