Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28703 | Canola | cytosol | 91.23 | 93.98 |
| Bra040595.1-P | Field mustard | cytosol | 76.8 | 91.84 |
| AT4G14980.1 | Thale cress | cytosol | 66.86 | 62.94 |
| AT2G04500.1 | Thale cress | cytosol | 59.06 | 61.21 |
| AT5G44770.1 | Thale cress | cytosol, nucleus, peroxisome | 64.13 | 60.81 |
| AT5G54030.1 | Thale cress | cytosol | 47.17 | 57.76 |
| AT5G54050.1 | Thale cress | nucleus | 64.33 | 56.9 |
| AT5G54040.1 | Thale cress | cytosol | 64.52 | 55.54 |
| AT5G54020.2 | Thale cress | nucleus | 63.35 | 55.27 |
| AT5G29624.1 | Thale cress | cytosol | 51.46 | 54.1 |
| CDX97701 | Canola | cytosol | 19.49 | 47.17 |
| CDY30196 | Canola | cytosol | 32.36 | 40.59 |
| CDY21921 | Canola | plastid | 29.63 | 40.0 |
| CDY06776 | Canola | cytosol | 22.03 | 39.65 |
| CDY29992 | Canola | cytosol | 19.69 | 38.55 |
| CDY41709 | Canola | peroxisome | 38.6 | 37.64 |
| CDY63456 | Canola | cytosol | 28.66 | 37.22 |
| CDY63290 | Canola | cytosol | 35.67 | 36.45 |
| CDY46706 | Canola | mitochondrion | 37.82 | 36.4 |
| CDY36839 | Canola | cytosol | 42.11 | 35.7 |
| CDY69979 | Canola | nucleus | 44.05 | 35.48 |
| CDY52787 | Canola | nucleus | 43.47 | 35.34 |
| CDX74183 | Canola | cytosol | 23.2 | 34.59 |
| CDY58516 | Canola | nucleus | 33.72 | 34.46 |
| CDY22036 | Canola | cytosol | 39.77 | 34.23 |
| CDY27940 | Canola | cytosol | 37.62 | 34.22 |
| CDY21132 | Canola | cytosol | 40.55 | 33.99 |
| CDY48718 | Canola | cytosol | 24.37 | 33.69 |
| CDY60784 | Canola | cytosol | 22.03 | 33.63 |
| CDY52927 | Canola | cytosol | 24.37 | 33.16 |
| CDY65338 | Canola | cytosol | 42.88 | 32.84 |
| CDY29993 | Canola | cytosol | 39.38 | 32.74 |
| CDY22034 | Canola | endoplasmic reticulum | 38.21 | 31.16 |
| CDX93183 | Canola | cytosol | 39.77 | 30.63 |
| CDX71062 | Canola | cytosol | 37.23 | 30.51 |
| CDY44167 | Canola | cytosol | 29.24 | 30.49 |
| CDX88733 | Canola | cytosol | 37.04 | 30.45 |
| CDY52789 | Canola | cytosol | 23.98 | 30.3 |
| CDY64703 | Canola | cytosol | 38.99 | 30.12 |
| CDX67463 | Canola | cytosol | 26.71 | 29.53 |
| CDY44574 | Canola | cytosol | 27.68 | 29.46 |
| CDY30007 | Canola | cytosol, nucleus, plastid | 37.82 | 29.17 |
| CDY22883 | Canola | cytosol | 36.65 | 28.79 |
| CDY42579 | Canola | nucleus | 15.2 | 28.47 |
| CDY27938 | Canola | cytosol | 24.17 | 28.25 |
| CDY63460 | Canola | cytosol, mitochondrion | 22.42 | 27.64 |
| CDY09240 | Canola | cytosol | 25.54 | 27.58 |
| CDY09238 | Canola | cytosol | 25.54 | 27.58 |
| CDY36353 | Canola | plastid | 16.57 | 27.24 |
| CDY43524 | Canola | cytosol | 26.71 | 27.08 |
| CDY50383 | Canola | cytosol | 43.47 | 26.45 |
| CDY40661 | Canola | cytosol | 38.4 | 25.85 |
| CDX74184 | Canola | plasma membrane | 20.47 | 25.61 |
| CDY22052 | Canola | nucleus | 30.8 | 24.96 |
| CDY22035 | Canola | cytosol | 41.52 | 24.04 |
| CDY50382 | Canola | cytosol | 41.91 | 21.67 |
| CDX82703 | Canola | cytosol | 38.99 | 20.73 |
| KRG95394 | Soybean | nucleus | 22.42 | 20.28 |
| KRH67075 | Soybean | nucleus | 22.03 | 19.82 |
Protein Annotations
| EnsemblPlants:CDY51540 | EnsemblPlantsGene:GSBRNA2T00003644001 | Gene3D:3.30.60.20 | GO:A0A078IKI9 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0047134 | InterPro:DC1 | PFAM:PF03107 | ProteinID:CDY51540 | ProteinID:CDY51540.1 | SEG:seg |
| SUPFAM:SSF57889 | UniParc:UPI0004EE1DFB | UniProt:A0A078IKI9 | MapMan:35.2 | : | : |
Description
BnaA05g33400DBnaA05g33400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKI9]
Coordinates
chrLK033004:+:61255..62850
Molecular Weight (calculated)
58870.1 Da
IEP (calculated)
6.282
GRAVY (calculated)
-0.315
Length
513 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKSNQMLPF HDHPLYTVDD DQSWFCYICS TNEKRGIVYI CMECELVTHK ECVEPFLNNP FQCNHFLKFF TGSPFESENS HCHFCRKNLS SLYARCTICN
101: TSMDVDCLKN PPPLTIFQPK HHEHRLTLLS RLVTFTCNAC GLEGDRNPYV CLQCNMMLHK DCIDLPRVIS INRHDHRISH TFHLGQGQED WECGVCRKKI
201: DWVYGAFKCS RCPSYAVHSN CATRNEVWDG IELEDVPDEE EEIEDPYKVV NEKDIIHFSH ENHILRLDES CVTDMRCEGC VLPFNGDACY KCVECDFILH
301: KTCASLPRKK RHLLHNHKLT LLVDEVTFQC RACKINSNGF SSVSEPFHHD LHPHPLYWTL EGSKECHACD TETKNPLCCT VCDDYALCMR CTTLPRKVKH
401: RCDDHLLSLS QGVGNASGDL WCDVCECKVI ASESYYTCQE CGVSLDLDCV LGDFYYLKVG HIGPGLEVLA NNGVTRPLCS GCEVRCKFPF LARDTTTQEP
501: VCYFCNINCL HYH
101: TSMDVDCLKN PPPLTIFQPK HHEHRLTLLS RLVTFTCNAC GLEGDRNPYV CLQCNMMLHK DCIDLPRVIS INRHDHRISH TFHLGQGQED WECGVCRKKI
201: DWVYGAFKCS RCPSYAVHSN CATRNEVWDG IELEDVPDEE EEIEDPYKVV NEKDIIHFSH ENHILRLDES CVTDMRCEGC VLPFNGDACY KCVECDFILH
301: KTCASLPRKK RHLLHNHKLT LLVDEVTFQC RACKINSNGF SSVSEPFHHD LHPHPLYWTL EGSKECHACD TETKNPLCCT VCDDYALCMR CTTLPRKVKH
401: RCDDHLLSLS QGVGNASGDL WCDVCECKVI ASESYYTCQE CGVSLDLDCV LGDFYYLKVG HIGPGLEVLA NNGVTRPLCS GCEVRCKFPF LARDTTTQEP
501: VCYFCNINCL HYH
001: MSSTDVEVVT FPFHDHPLSC CDDPVAAEFY CSLCSHYHSL SWQVFRSGVW QNEVEPWFRT SEYHGPALRI SNNINYHCKE CDIMMHKDCV DRLFNQPFIC
101: NHILKIFVST ISPLDSIVDD LCHFCRFEVH HMFLRCTICN ISLHIGCVAE PPPLTISEPK HHKHSLSLLL RLVTFTCNAC GVEGDRNPYV CLECNLMVHK
201: DCVENLPRVI SINRHDHRIS HTFHLGEKEG DWECGVCRKM INWVYGGYKC SRCPSYAVHS KCATKKEVWD GLELEDVPEE EEEIKDPFKV INEKGDIVHF
301: SHEKHILRLD ENYVTDDANM RCRCCILAIN GDPCYKCMEC DFILHKACAN LPRKRRHLLH NHKLTLSSRR IDEDNFLECS ACRIYTDGFI YECLHEDCEN
401: KNAYDVRCSS VSEPFHHDLH QHPLYFTLQS SRRCQACNKE IKDDPLNCTV CDEYSLCMRC ATLPRKVKHR CDDHFLSLCQ GVGNASGDLW CDICETKTDP
501: SVRYYTCDEC GLSLHIDCVL GDLYYMKLGH QNPEMEIHPN NGATRPSCAR CGFRCKFPFF VRGTKEQSAL YVCSIDLCPR
101: NHILKIFVST ISPLDSIVDD LCHFCRFEVH HMFLRCTICN ISLHIGCVAE PPPLTISEPK HHKHSLSLLL RLVTFTCNAC GVEGDRNPYV CLECNLMVHK
201: DCVENLPRVI SINRHDHRIS HTFHLGEKEG DWECGVCRKM INWVYGGYKC SRCPSYAVHS KCATKKEVWD GLELEDVPEE EEEIKDPFKV INEKGDIVHF
301: SHEKHILRLD ENYVTDDANM RCRCCILAIN GDPCYKCMEC DFILHKACAN LPRKRRHLLH NHKLTLSSRR IDEDNFLECS ACRIYTDGFI YECLHEDCEN
401: KNAYDVRCSS VSEPFHHDLH QHPLYFTLQS SRRCQACNKE IKDDPLNCTV CDEYSLCMRC ATLPRKVKHR CDDHFLSLCQ GVGNASGDLW CDICETKTDP
501: SVRYYTCDEC GLSLHIDCVL GDLYYMKLGH QNPEMEIHPN NGATRPSCAR CGFRCKFPFF VRGTKEQSAL YVCSIDLCPR
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:F4JYT3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.