Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040595.1-P | Field mustard | cytosol | 57.61 | 73.19 |
| CDY51540 | Canola | nucleus | 62.94 | 66.86 |
| CDY28703 | Canola | cytosol | 59.63 | 65.26 |
| AT2G04500.1 | Thale cress | cytosol | 57.61 | 63.43 |
| AT5G54030.1 | Thale cress | cytosol | 48.07 | 62.53 |
| AT5G44770.1 | Thale cress | cytosol, nucleus, peroxisome | 61.1 | 61.55 |
| AT5G54050.1 | Thale cress | nucleus | 64.95 | 61.03 |
| AT5G29624.1 | Thale cress | cytosol | 54.13 | 60.45 |
| AT5G54040.1 | Thale cress | cytosol | 63.49 | 58.05 |
| AT5G54020.2 | Thale cress | nucleus | 62.2 | 57.65 |
| AT1G58037.1 | Thale cress | cytosol | 31.93 | 50.73 |
| AT5G45730.1 | Thale cress | nucleus | 49.72 | 48.39 |
| AT3G06990.1 | Thale cress | nucleus | 46.24 | 46.75 |
| AT3G07000.1 | Thale cress | cytosol | 46.79 | 44.43 |
| AT4G01925.1 | Thale cress | cytosol | 22.57 | 43.93 |
| AT2G43220.1 | Thale cress | peroxisome | 38.9 | 39.41 |
| AT4G11540.1 | Thale cress | cytosol | 37.8 | 39.24 |
| AT3G27510.1 | Thale cress | cytosol | 31.38 | 38.86 |
| AT5G40320.1 | Thale cress | nucleus | 41.65 | 38.22 |
| AT4G16015.1 | Thale cress | cytosol | 36.15 | 36.82 |
| AT4G11390.2 | Thale cress | cytosol | 36.88 | 36.81 |
| AT4G01910.1 | Thale cress | cytosol | 43.3 | 36.25 |
| AT4G01920.1 | Thale cress | cytosol | 43.49 | 36.02 |
| AT4G01930.1 | Thale cress | cytosol | 42.75 | 35.74 |
| AT4G11550.1 | Thale cress | cytosol | 42.94 | 35.03 |
| AT4G01740.1 | Thale cress | cytosol | 41.83 | 34.97 |
| AT5G22355.1 | Thale cress | cytosol | 42.57 | 34.94 |
| AT3G46800.1 | Thale cress | cytosol | 43.49 | 34.75 |
| AT4G02190.1 | Thale cress | cytosol | 41.65 | 34.45 |
| AT1G65180.1 | Thale cress | nucleus | 41.1 | 34.3 |
| AT3G48400.1 | Thale cress | cytosol | 38.72 | 34.09 |
| AT2G19660.2 | Thale cress | nucleus | 42.94 | 33.91 |
| AT4G01760.1 | Thale cress | cytosol | 41.47 | 33.88 |
| AT3G27480.1 | Thale cress | cytosol, nucleus, peroxisome | 36.7 | 33.11 |
| AT3G27473.1 | Thale cress | cytosol | 39.63 | 32.63 |
| AT2G04680.1 | Thale cress | cytosol | 39.27 | 32.57 |
| AT3G46810.1 | Thale cress | cytosol | 40.92 | 32.51 |
| AT3G43890.1 | Thale cress | cytosol | 39.08 | 32.22 |
| AT4G01350.1 | Thale cress | cytosol | 38.53 | 32.21 |
| AT5G37620.1 | Thale cress | cytosol | 38.17 | 31.9 |
| AT1G69150.1 | Thale cress | cytosol | 30.09 | 31.72 |
| AT2G19650.1 | Thale cress | cytosol | 39.63 | 31.67 |
| AT5G59930.1 | Thale cress | cytosol, nucleus, plasma membrane | 37.8 | 31.4 |
| AT5G59940.1 | Thale cress | cytosol | 37.43 | 31.34 |
| AT3G27500.1 | Thale cress | cytosol | 39.63 | 31.21 |
| AT3G27490.1 | Thale cress | cytosol | 38.9 | 31.09 |
| AT5G42840.1 | Thale cress | cytosol | 37.8 | 30.7 |
| AT3G28650.1 | Thale cress | cytosol | 37.43 | 30.68 |
| AT3G45530.1 | Thale cress | cytosol | 38.53 | 30.35 |
| AT5G59920.1 | Thale cress | cytosol | 39.45 | 30.28 |
| AT4G13992.1 | Thale cress | mitochondrion | 35.05 | 29.75 |
| AT3G45840.1 | Thale cress | mitochondrion, nucleus, peroxisome, vacuole | 32.11 | 29.61 |
| KRG95394 | Soybean | nucleus | 24.22 | 23.28 |
| AT4G02180.1 | Thale cress | cytosol | 41.83 | 23.05 |
| KRH67075 | Soybean | nucleus | 23.49 | 22.46 |
Protein Annotations
| MapMan:35.2 | EntrezGene:827157 | ProteinID:AEE83533.1 | ArrayExpress:AT4G14980 | EnsemblPlantsGene:AT4G14980 | RefSeq:AT4G14980 |
| TAIR:AT4G14980 | RefSeq:AT4G14980-TAIR-G | EnsemblPlants:AT4G14980.1 | TAIR:AT4G14980.1 | Unigene:At.33224 | InterPro:DC1 |
| UniProt:F4JIJ2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0035556 | GO:GO:0046872 |
| InterPro:IPR002219 | RefSeq:NP_193234.4 | InterPro:PE/DAG-bd | PFAM:PF03107 | PO:PO:0000037 | PO:PO:0000256 |
| PO:PO:0000262 | PO:PO:0001078 | PO:PO:0009005 | PO:PO:0009010 | PFscan:PS50081 | PANTHER:PTHR32410 |
| SMART:SM00109 | SUPFAM:SSF57889 | UniParc:UPI0001A7B10B | SEG:seg | : | : |
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:F4JIJ2]
Coordinates
chr4:-:8561876..8563667
Molecular Weight (calculated)
62331.7 Da
IEP (calculated)
6.593
GRAVY (calculated)
-0.246
Length
545 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSTESEIET RPNLLVPLHE HPLSCTEEFI YSCDFCNSRN GIAYQCTECG YRLHKDCIQG FLSYPSPCGH SLKISMPNKS PQYANDRCHF CLCKLKTPFA
101: RCTVCNINIS PLCMVKQPPL TICNPKHHKH SLTLLVRLVI FTCNACGVEG DRNPYVCLQC NLMVHKDCIE NLPRVICINR HDHRIFHTFH LGQREEHWEC
201: GVCRKTVDWV YGAFKCSRCP NYAVHSRCAT KKEVWDGIEL EDVPEEEEEV EEPFVVINEK EIIHFSHEEH VLRLDENYVT DNVNMRCRGC VLAINGDSCY
301: KCVECDYILH KACASLPRKK RHLLHNHKLT LQVDEAASSD FVCTACRTYS NGFRYKCFEG CEDDVVYDVR CSSVSEPFQH DLHPHPLYWT LESSKRCQAC
401: GTETDDNLLN CTVCDDYALC MKCATLPRKV KHRCDDHFLS LCQGVGNASG NLWCDICETK TDPNVCYYTC EECGLSLHLN CVLGDFYYVK VIPDQPKVFA
501: NNGVTRLFCG VCEVRCKFPF IMWGAVGDFT GYVCSINCVF PKADK
101: RCTVCNINIS PLCMVKQPPL TICNPKHHKH SLTLLVRLVI FTCNACGVEG DRNPYVCLQC NLMVHKDCIE NLPRVICINR HDHRIFHTFH LGQREEHWEC
201: GVCRKTVDWV YGAFKCSRCP NYAVHSRCAT KKEVWDGIEL EDVPEEEEEV EEPFVVINEK EIIHFSHEEH VLRLDENYVT DNVNMRCRGC VLAINGDSCY
301: KCVECDYILH KACASLPRKK RHLLHNHKLT LQVDEAASSD FVCTACRTYS NGFRYKCFEG CEDDVVYDVR CSSVSEPFQH DLHPHPLYWT LESSKRCQAC
401: GTETDDNLLN CTVCDDYALC MKCATLPRKV KHRCDDHFLS LCQGVGNASG NLWCDICETK TDPNVCYYTC EECGLSLHLN CVLGDFYYVK VIPDQPKVFA
501: NNGVTRLFCG VCEVRCKFPF IMWGAVGDFT GYVCSINCVF PKADK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.