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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • plastid 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:nucleus
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G37620.1 Thale cress cytosol 69.71 70.25
AT2G19660.2 Thale cress nucleus 62.86 59.86
AT2G19650.1 Thale cress cytosol 57.08 54.99
AT3G46810.1 Thale cress cytosol 54.49 52.19
AT3G46800.1 Thale cress cytosol 54.03 52.05
AT4G01925.1 Thale cress cytosol 19.33 45.36
AT5G22355.1 Thale cress cytosol 44.29 43.83
AT3G48400.1 Thale cress cytosol 40.94 43.46
AT1G58037.1 Thale cress cytosol 22.37 42.86
AT4G01930.1 Thale cress cytosol 41.25 41.56
AT5G59940.1 Thale cress cytosol 40.94 41.32
AT4G02190.1 Thale cress cytosol 41.4 41.27
AT4G01910.1 Thale cress cytosol 40.79 41.17
AT4G11540.1 Thale cress cytosol 32.88 41.14
AT3G27510.1 Thale cress cytosol 27.55 41.14
AT2G43220.1 Thale cress peroxisome 33.33 40.71
AT4G11550.1 Thale cress cytosol 41.25 40.57
AT4G16015.1 Thale cress cytosol 33.03 40.56
AT4G01350.1 Thale cress cytosol 40.18 40.49
CDX82703 Canola cytosol 59.36 40.41
AT4G01760.1 Thale cress cytosol 40.94 40.33
AT1G65180.1 Thale cress nucleus 39.88 40.12
AT4G01920.1 Thale cress cytosol 40.03 39.97
AT5G59930.1 Thale cress cytosol, nucleus, plasma membrane 39.57 39.63
AT4G01740.1 Thale cress cytosol 39.27 39.57
AT5G40320.1 Thale cress nucleus 35.77 39.56
AT3G27480.1 Thale cress cytosol, nucleus, peroxisome 36.23 39.4
AT4G14980.1 Thale cress cytosol 32.57 39.27
AT3G27473.1 Thale cress cytosol 39.12 38.82
AT4G13992.1 Thale cress mitochondrion 37.9 38.78
AT3G06990.1 Thale cress nucleus 31.81 38.78
AT3G07000.1 Thale cress cytosol 33.79 38.68
AT5G44770.1 Thale cress cytosol, nucleus, peroxisome 31.81 38.63
AT3G43890.1 Thale cress cytosol 38.36 38.12
AT5G54030.1 Thale cress cytosol 24.2 37.95
AT1G69150.1 Thale cress cytosol 29.83 37.91
AT5G45730.1 Thale cress nucleus 31.96 37.5
AT5G59920.1 Thale cress cytosol 40.49 37.46
AT3G28650.1 Thale cress cytosol 37.75 37.29
AT3G45530.1 Thale cress cytosol 39.27 37.28
AT3G45840.1 Thale cress mitochondrion, nucleus, peroxisome, vacuole 33.33 37.06
AT3G27490.1 Thale cress cytosol 38.2 36.8
AT2G04500.1 Thale cress cytosol 27.7 36.77
AT5G42840.1 Thale cress cytosol 36.83 36.07
AT3G27500.1 Thale cress cytosol 37.9 35.98
AT5G54050.1 Thale cress nucleus 31.66 35.86
AT5G54020.2 Thale cress nucleus 31.96 35.71
AT5G54040.1 Thale cress cytosol 31.66 34.9
AT5G29624.1 Thale cress cytosol 25.72 34.63
AT4G11390.2 Thale cress cytosol 28.77 34.62
KRG95394 Soybean nucleus 22.98 26.63
AT4G02180.1 Thale cress cytosol 40.03 26.59
KRH67075 Soybean nucleus 22.22 25.61
Protein Annotations
Gene3D:3.30.40.10MapMan:35.2EntrezGene:815011ProteinID:AAD22338.1ProteinID:AEC05855.1ArrayExpress:AT2G04680
EnsemblPlantsGene:AT2G04680RefSeq:AT2G04680TAIR:AT2G04680RefSeq:AT2G04680-TAIR-GEnsemblPlants:AT2G04680.1TAIR:AT2G04680.1
EMBL:AY773838Unigene:At.41280InterPro:DC1GO:GO:0003674GO:GO:0005488GO:GO:0046872
InterPro:IPR013083RefSeq:NP_178545.1PFAM:PF03107PO:PO:0000256PO:PO:0000262PO:PO:0009005
UniProt:Q9SJ91SMART:SM00249SUPFAM:SSF57889UniParc:UPI00000AB79FInterPro:Znf_PHDInterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJ91]
Coordinates
chr2:+:1640058..1642209
Molecular Weight (calculated)
75752.5 Da
IEP (calculated)
7.148
GRAVY (calculated)
-0.340
Length
657 amino acids
Sequence
(BLAST)
001: MEIVEVSPIH KHPLLPITRF SREHCKCNVC GSVGYIYGGY CCNEVGCESM FHKECVESLS EIKHTSHPDH PLKLLISDKA SFCSRCEGRF ENGYICSICD
101: FKLDFRCAKG PAPLLILEKS NLHEHLLEFF VGWHSWKGHR ECKACGGAGF RGYRWYGCYQ CDTLFHGECA EFFPEAKHTS HPQHTLKHIT SEEAPDYADN
201: KCLLCEEEFD QQHPKIHHCD VCNFTICRAC MKNAPPVRIE SLTTHEHQLH LVPRRIDFTC NACGTLGDRS PYFCLQCNFM IHRQCIDLPR VININRHDHR
301: ISYTRRLGHG EWKCKVCRKK VDGFYGAYTC LKCPSFVVHS LCATRNDVWD MIELEGMQEE EEIAPYEMID ANTIKHFSHD HNLQINNDGH GRIQPENIVC
401: EACVFQILSE PFYSCNQCSF ILHEKCANHP RKKRHVCNNT SFILFTDSCN KANASCGLCK QHFTGFRYES GPYVTIDVRC AAILDTIEHG SHQHPLYYYT
501: TFDWKPCSRC REEGAVLFRC DECDYILDGN CALFPKKVMR NRYDDHLLFL SFGDKNVSGD YWCEACETKV NPKEWFYTCN DCGTILHISC VVGDFSYIMP
601: GSHITTWRAN VVSNTSICRP VCYMCNSRCK LPSVLKLSDT KVDVYLCSFK CAYFIRK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.