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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G01925.1 Thale cress cytosol 34.2 79.64
AT4G01910.1 Thale cress cytosol 76.69 76.8
AT4G01920.1 Thale cress cytosol 73.77 73.1
AT4G01740.1 Thale cress cytosol 71.17 71.17
AT4G11540.1 Thale cress cytosol 55.52 68.95
CDY52787 Canola nucleus 66.72 68.94
CDY69979 Canola nucleus 66.56 68.13
CDY52789 Canola cytosol 42.33 67.98
AT4G01760.1 Thale cress cytosol 68.25 66.72
AT4G02190.1 Thale cress cytosol 66.41 65.71
CDY65338 Canola cytosol 67.48 65.67
AT4G11550.1 Thale cress cytosol 66.87 65.27
CDY22036 Canola cytosol 59.66 65.27
CDY21921 Canola plastid 37.12 63.68
CDY22034 Canola endoplasmic reticulum 60.89 63.12
AT4G11390.2 Thale cress cytosol 46.17 55.13
CDY22052 Canola nucleus 49.39 50.87
CDY50383 Canola cytosol 65.18 50.42
AT1G65180.1 Thale cress nucleus 50.31 50.23
AT1G69150.1 Thale cress cytosol 39.11 49.32
AT3G43890.1 Thale cress cytosol 49.54 48.87
AT4G02180.1 Thale cress cytosol 73.93 48.74
CDY22035 Canola cytosol 65.18 47.97
AT1G58037.1 Thale cress cytosol 24.85 47.23
AT3G06990.1 Thale cress nucleus 35.89 43.41
AT5G45730.1 Thale cress nucleus 37.27 43.39
AT5G22355.1 Thale cress cytosol 43.71 42.92
AT2G04500.1 Thale cress cytosol 32.52 42.83
AT4G14980.1 Thale cress cytosol 35.74 42.75
AT3G27510.1 Thale cress cytosol 28.53 42.27
AT3G27480.1 Thale cress cytosol, nucleus, peroxisome 39.11 42.22
AT5G44770.1 Thale cress cytosol, nucleus, peroxisome 34.97 42.14
CDY50382 Canola cytosol 64.11 42.14
AT3G27473.1 Thale cress cytosol 42.48 41.84
AT2G43220.1 Thale cress peroxisome 34.51 41.82
AT3G07000.1 Thale cress cytosol 36.5 41.46
AT3G48400.1 Thale cress cytosol 39.26 41.36
AT3G46800.1 Thale cress cytosol 43.25 41.35
AT2G04680.1 Thale cress cytosol 41.56 41.25
AT5G40320.1 Thale cress nucleus 37.58 41.25
AT3G28650.1 Thale cress cytosol 42.02 41.2
AT4G16015.1 Thale cress cytosol 33.74 41.12
AT4G01350.1 Thale cress cytosol 40.95 40.95
AT2G19660.2 Thale cress nucleus 43.25 40.87
AT5G59930.1 Thale cress cytosol, nucleus, plasma membrane 40.95 40.7
AT5G54050.1 Thale cress nucleus 36.2 40.69
AT3G46810.1 Thale cress cytosol 42.48 40.38
AT5G37620.1 Thale cress cytosol 40.03 40.03
AT3G45530.1 Thale cress cytosol 42.33 39.88
AT5G59940.1 Thale cress cytosol 39.57 39.63
AT5G29624.1 Thale cress cytosol 29.6 39.55
AT5G54030.1 Thale cress cytosol 25.31 39.38
AT3G27490.1 Thale cress cytosol 41.1 39.3
AT5G42840.1 Thale cress cytosol 40.34 39.2
AT5G54040.1 Thale cress cytosol 35.74 39.09
AT5G59920.1 Thale cress cytosol 42.33 38.87
AT3G27500.1 Thale cress cytosol 41.26 38.87
AT4G13992.1 Thale cress mitochondrion 38.19 38.78
AT2G19650.1 Thale cress cytosol 40.18 38.42
AT5G54020.2 Thale cress nucleus 34.2 37.93
AT3G45840.1 Thale cress mitochondrion, nucleus, peroxisome, vacuole 33.13 36.55
KRG95394 Soybean nucleus 23.31 26.81
Bra036288.1-P Field mustard cytosol, nucleus, plasma membrane 67.94 26.48
KRH67075 Soybean nucleus 23.01 26.32
Protein Annotations
MapMan:35.2EntrezGene:828198ProteinID:AAD22655.1ProteinID:AEE82101.1ArrayExpress:AT4G01930EnsemblPlantsGene:AT4G01930
RefSeq:AT4G01930TAIR:AT4G01930RefSeq:AT4G01930-TAIR-GEnsemblPlants:AT4G01930.1TAIR:AT4G01930.1Unigene:At.65317
ProteinID:CAB80686.1InterPro:DC1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0035556
GO:GO:0046872InterPro:IPR002219RefSeq:NP_192102.1InterPro:PE/DAG-bdPFAM:PF03107PO:PO:0001078
PO:PO:0004507PO:PO:0007611PO:PO:0007616PO:PO:0009005PO:PO:0009009PO:PO:0009010
PO:PO:0009032PO:PO:0009046PFscan:PS50081UniProt:Q9SYJ0SMART:SM00109SUPFAM:SSF57889
UniParc:UPI000009D112:::::
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9SYJ0]
Coordinates
chr4:-:838677..840825
Molecular Weight (calculated)
75262.1 Da
IEP (calculated)
7.411
GRAVY (calculated)
-0.324
Length
652 amino acids
Sequence
(BLAST)
001: MDSEGVSLPL IHKHHMLPWN DMRKGDCCRR FEAISDGYYC KTCDFFVHKS CGDRSSEYIE HPSHPSHALQ LLRKPGHTRN CNLCGISIKS LFYNCEICNF
101: NVHMYCAKYP PPQVIDISET HHHKLNLYKK PNYIDCGDKC GKLSYEFSYK CQECDLAFHV DCAWRPSESN LPLEVNHFYH SLHPLKLVRG KLPDYSDRKC
201: RLCGRYIGDR LFYHCSSCNF TLDMRCVLNP PQQSLLNLKA HDHQLTLLPR LDSFTCNACG LKGDRSPYVC FQCGFMIHQD CLDLPRVINI NRHDHRVSRT
301: SVLGVVKSVC GVCHQKVDWT CGGFSCQRCH GYVVHSKCAT RKDVWNGKEL EGVPEETEDI QPYVVIDENT IQHFSHKEHY LRLHVNGVLC DDNKWCSACT
401: HPICLQSFYG CMDCDFILHQ NCAGFRRMKW HVLHNERLTL VINEAEPFRC YACDRWSNGF RYHQGNITFD VRCGSIAEPF LHPSHPDHPL YHTLPDGGIK
501: ICNGCKNGFY DVLGCIEDDC RFAICFKCAT FPQVVKHRVD DHPLSLCYGE KASGKYWCDI CEKETNPEIW FYTCKDYQAS LHIECVVGAL SLLMPRSTIN
601: PWEKSYEVVL NNSASRPFCS YCELRCIFPI ILKRLGSSDN YVCSYFCALF CI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.