Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G59930.1 Thale cress cytosol, nucleus, plasma membrane 64.06 63.57
AT4G01350.1 Thale cress cytosol 63.29 63.19
AT5G59920.1 Thale cress cytosol 64.82 59.44
CDY64703 Canola cytosol 57.3 56.17
CDX74184 Canola plasma membrane 34.56 54.88
CDY30007 Canola cytosol, nucleus, plastid 55.91 54.74
AT5G22355.1 Thale cress cytosol 53.46 52.41
CDX74183 Canola cytosol 27.65 52.33
CDY63290 Canola cytosol 39.02 50.6
Bra001113.1-P Field mustard cytosol 35.33 49.89
CDY40661 Canola cytosol 55.61 47.51
AT3G45840.1 Thale cress mitochondrion, nucleus, peroxisome, vacuole 42.24 46.53
AT3G48400.1 Thale cress cytosol 44.09 46.37
AT4G01910.1 Thale cress cytosol 41.63 41.63
AT2G19660.2 Thale cress nucleus 43.78 41.3
AT3G46810.1 Thale cress cytosol 43.32 41.11
AT4G01925.1 Thale cress cytosol 17.67 41.07
AT4G11540.1 Thale cress cytosol 33.03 40.95
AT2G04680.1 Thale cress cytosol 41.32 40.94
AT4G02190.1 Thale cress cytosol 41.17 40.67
AT5G37620.1 Thale cress cytosol 40.55 40.49
AT3G46800.1 Thale cress cytosol 41.94 40.03
AT4G11550.1 Thale cress cytosol 40.71 39.67
AT4G01930.1 Thale cress cytosol 39.63 39.57
AT4G01920.1 Thale cress cytosol 39.63 39.21
AT1G65180.1 Thale cress nucleus 39.32 39.2
AT4G01760.1 Thale cress cytosol 39.94 38.98
AT4G16015.1 Thale cress cytosol 31.8 38.69
AT5G45730.1 Thale cress nucleus 33.03 38.39
AT1G58037.1 Thale cress cytosol 20.12 38.19
AT4G01740.1 Thale cress cytosol 38.25 38.19
AT2G19650.1 Thale cress cytosol 39.94 38.12
AT2G43220.1 Thale cress peroxisome 31.18 37.73
AT4G14980.1 Thale cress cytosol 31.34 37.43
AT5G44770.1 Thale cress cytosol, nucleus, peroxisome 31.03 37.34
AT3G06990.1 Thale cress nucleus 30.72 37.11
AT5G54030.1 Thale cress cytosol 23.81 36.99
AT3G27510.1 Thale cress cytosol 24.88 36.82
AT2G04500.1 Thale cress cytosol 27.96 36.77
AT3G43890.1 Thale cress cytosol 37.33 36.76
AT3G07000.1 Thale cress cytosol 32.41 36.76
AT3G27480.1 Thale cress cytosol, nucleus, peroxisome 33.95 36.59
AT3G27473.1 Thale cress cytosol 37.17 36.56
AT5G54050.1 Thale cress nucleus 32.41 36.38
AT5G40320.1 Thale cress nucleus 33.03 36.2
AT1G69150.1 Thale cress cytosol 28.57 35.98
AT5G54020.2 Thale cress nucleus 31.95 35.37
AT5G54040.1 Thale cress cytosol 32.1 35.07
AT3G28650.1 Thale cress cytosol 35.79 35.04
AT3G45530.1 Thale cress cytosol 37.17 34.97
AT4G13992.1 Thale cress mitochondrion 34.41 34.89
AT5G29624.1 Thale cress cytosol 25.81 34.43
AT3G27490.1 Thale cress cytosol 35.94 34.31
AT5G42840.1 Thale cress cytosol 35.33 34.28
AT3G27500.1 Thale cress cytosol 36.41 34.25
AT4G11390.2 Thale cress cytosol 28.26 33.7
KRG95394 Soybean nucleus 23.35 26.81
AT4G02180.1 Thale cress cytosol 40.25 26.49
KRH67075 Soybean nucleus 22.58 25.79
Protein Annotations
MapMan:35.2EntrezGene:836116ProteinID:AED97253.1ArrayExpress:AT5G59940EnsemblPlantsGene:AT5G59940RefSeq:AT5G59940
TAIR:AT5G59940RefSeq:AT5G59940-TAIR-GEnsemblPlants:AT5G59940.1TAIR:AT5G59940.1ProteinID:BAB08362.1InterPro:DC1
GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0035556GO:GO:0046872InterPro:IPR002219
RefSeq:NP_200802.1InterPro:PE/DAG-bdPFAM:PF03107PO:PO:0000037PO:PO:0000084PO:PO:0004507
PO:PO:0007115PO:PO:0007611PO:PO:0007616PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009025PO:PO:0009030PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0020100
PO:PO:0025022PO:PO:0025195UniProt:Q9FJE2SMART:SM00109SMART:SM00249SUPFAM:SSF57889
UniParc:UPI00000A751FInterPro:Znf_PHD::::
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9FJE2]
Coordinates
chr5:+:24137225..24139483
Molecular Weight (calculated)
72734.9 Da
IEP (calculated)
6.526
GRAVY (calculated)
-0.157
Length
651 amino acids
Sequence
(BLAST)
001: MDTGAVKLPI HEHPIFPSAR IVFSTCKGCG VEDFVYGGYV CNDSDCKARF HKECAEAPSE ISHSFHQQHP LFLTNGLGDL PCDLCGQKRL EAAGYSCPTC
101: EFKLDLTCGI NPSPPAIEHP ICHDHPLVFL KKREEKAPCE VCKDSIGGPS YSCLGCDLYF HVDCVHLSKE VNHPCHPSHP LKLIASESLT DNAEKICLLC
201: EQQPENMLYY CSVCNFTSCL GCTKRPPPLF IEHTKTHKHQ LTLFLNGISY QGSALTYNSR AYMCLPCGFV VNGNGINLPQ VININRHDHR ISYTHQLGPG
301: YLNCGVCREI VDRDCGAYAC VVCSNYAVHW ECAVHDNVWD GVELEGTSEI TEDIAPFKVM GDNLISHFSH EQHTLRLHKE GIIHDAYALC EACTYPIGFD
401: PIYSCEECHF ILHEKCANLP MKKRLVFATT PFKLVGASSR VRDVIDCGYC GECSTGFKYA SQRGWEIDVH CGSLSEPFVH NGHLHPLYFD SKENHSCNAC
501: HKVTVHMLCC NACDFDLCLS CASLPLKIRH RNDEHPLTLS CGETANGKYW CDICETELDP SKWFYTSFDC GVTLHVECVL GDFSRLMPGR MVDTVGGKKF
601: YVVLNNHNTR PLCSMCRSRC KVSVILKACD EDNVYICSRS CFSDMVSARS C
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.