Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY52927 Canola cytosol 34.9 63.13
AT5G37620.1 Thale cress cytosol 54.69 57.21
CDX93183 Canola cytosol 55.87 57.21
AT2G04680.1 Thale cress cytosol 54.99 57.08
Bra017007.1-P Field mustard nucleus 48.53 56.78
AT2G19660.2 Thale cress nucleus 55.57 54.93
AT3G46800.1 Thale cress cytosol 51.76 51.76
AT3G46810.1 Thale cress cytosol 51.17 50.87
AT5G22355.1 Thale cress cytosol 42.96 44.13
AT4G01925.1 Thale cress cytosol 18.04 43.93
AT1G58037.1 Thale cress cytosol 21.99 43.73
AT3G48400.1 Thale cress cytosol 39.0 42.97
AT3G27510.1 Thale cress cytosol 26.83 41.59
AT4G11540.1 Thale cress cytosol 31.96 41.52
AT5G40320.1 Thale cress nucleus 35.48 40.74
AT4G01910.1 Thale cress cytosol 38.86 40.71
AT2G43220.1 Thale cress peroxisome 31.96 40.52
AT4G01760.1 Thale cress cytosol 39.59 40.48
AT4G01930.1 Thale cress cytosol 38.42 40.18
AT5G59930.1 Thale cress cytosol, nucleus, plasma membrane 38.56 40.09
AT4G02190.1 Thale cress cytosol 38.71 40.06
AT4G16015.1 Thale cress cytosol 31.38 40.0
AT5G59940.1 Thale cress cytosol 38.12 39.94
AT4G11550.1 Thale cress cytosol 39.0 39.82
AT3G27480.1 Thale cress cytosol, nucleus, peroxisome 35.19 39.74
AT4G01920.1 Thale cress cytosol 38.27 39.67
AT4G14980.1 Thale cress cytosol 31.67 39.63
AT4G01350.1 Thale cress cytosol 37.83 39.57
AT3G07000.1 Thale cress cytosol 33.28 39.55
AT1G69150.1 Thale cress cytosol 29.91 39.46
AT3G06990.1 Thale cress nucleus 30.94 39.15
AT4G13992.1 Thale cress mitochondrion 36.66 38.94
AT5G44770.1 Thale cress cytosol, nucleus, peroxisome 30.79 38.82
AT5G45730.1 Thale cress nucleus 31.82 38.75
AT5G54030.1 Thale cress cytosol 23.75 38.66
AT3G27473.1 Thale cress cytosol 37.39 38.52
AT1G65180.1 Thale cress nucleus 36.8 38.44
AT5G54050.1 Thale cress nucleus 32.4 38.1
AT5G54020.2 Thale cress nucleus 32.84 38.1
AT4G01740.1 Thale cress cytosol 36.36 38.04
AT2G04500.1 Thale cress cytosol 27.57 37.98
AT3G43890.1 Thale cress cytosol 36.8 37.97
AT3G27490.1 Thale cress cytosol 37.54 37.54
AT3G28650.1 Thale cress cytosol 36.51 37.44
AT3G45840.1 Thale cress mitochondrion, nucleus, peroxisome, vacuole 32.11 37.06
AT5G59920.1 Thale cress cytosol 37.98 36.48
AT3G27500.1 Thale cress cytosol 36.95 36.42
AT5G42840.1 Thale cress cytosol 35.48 36.07
AT5G54040.1 Thale cress cytosol 31.38 35.91
AT3G45530.1 Thale cress cytosol 36.36 35.84
AT4G11390.2 Thale cress cytosol 28.15 35.16
AT5G29624.1 Thale cress cytosol 25.07 35.04
AT4G02180.1 Thale cress cytosol 38.56 26.59
KRG95394 Soybean nucleus 21.85 26.28
KRH67075 Soybean nucleus 21.26 25.44
Protein Annotations
MapMan:35.2EntrezGene:816484ProteinID:AAD10163.1ProteinID:AEC06908.1EMBL:AK226607ArrayExpress:AT2G19650
EnsemblPlantsGene:AT2G19650RefSeq:AT2G19650TAIR:AT2G19650RefSeq:AT2G19650-TAIR-GEnsemblPlants:AT2G19650.1TAIR:AT2G19650.1
EMBL:AY099827Unigene:At.27707EMBL:BT000783EMBL:BT002184InterPro:DC1GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
GO:GO:0035556InterPro:IPR002219RefSeq:NP_179555.1InterPro:PE/DAG-bdPFAM:PF03107PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281UniProt:Q9ZUM8SMART:SM00109
SUPFAM:SSF57889UniParc:UPI00000AC605SEG:seg:::
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUM8]
Coordinates
chr2:-:8493469..8495892
Molecular Weight (calculated)
79122.4 Da
IEP (calculated)
7.030
GRAVY (calculated)
-0.423
Length
682 amino acids
Sequence
(BLAST)
001: MENFLALFNE GMDEEASRLE KLLPFHEHPL IPFTRFEFTK CKGCYSTDED NTSFISKHPG CSYIYGGHRC NEPGCDVVFH EECAKPLPEI DHPYHPVHPL
101: KLILLHTRVS NCSFCGEFFS VGYRCNKCDF QLDLICARRP ALLVLAENSY LHEHPLQLSH EAHETLRDCK GCGHQHNSWK HFYTCHQCEF FISLDCIDHN
201: SPEAYHTSHP QHPLKSLRYE VPGYADKKCL LCREEFDGIH RQLHHCGVCN FSICRSCMKN PPPVLVKSPR THEHQLHLVP RRIDFTCNAC GTLGDRSPYF
301: CLQCNFMIHR ECIDLPRVIN INRHDHRISY TPRLGHGDGK CRVCRKNVDG FYGAYSCSKC FDYFVHSRCA TRRDVWDMIE LEGTPEEEET APFKVIDDNT
401: IDHYGHKHNL RIYRGWNLPE SVVCTACVFQ ICSEPFYACA RKRCDFIIHE KCAKLPLKKR HVCHNQPLEL SPNYGTYLLH RCSICRQLFT GFSYESKELR
501: IDVRCATVTE PFEHKSHQHP LHYSTDHSKR CSECDGDGKL SCDDCEFGLC FKCAILPQKV MRHRYDDHPL FLSYGEMGVA GKYWCEACET TVNPEKWFYT
601: CNECGITLHI SCVIDTYAYS MPGALTWIGT FVSNHSICRP LCCVCNSRCK LPFVRTLPED GADLYFCSLE CEKKIYQERF EF
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.