Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60784 | Canola | cytosol | 39.81 | 63.39 |
| AT4G13992.1 | Thale cress | mitochondrion | 69.72 | 58.1 |
| AT4G01925.1 | Thale cress | cytosol | 21.31 | 40.71 |
| AT2G43220.1 | Thale cress | peroxisome | 39.44 | 39.22 |
| AT5G45730.1 | Thale cress | nucleus | 40.75 | 38.93 |
| AT4G11540.1 | Thale cress | cytosol | 38.13 | 38.86 |
| AT1G58037.1 | Thale cress | cytosol | 24.49 | 38.19 |
| AT3G06990.1 | Thale cress | nucleus | 38.13 | 37.85 |
| AT3G27510.1 | Thale cress | cytosol | 30.84 | 37.5 |
| AT3G07000.1 | Thale cress | cytosol | 40.0 | 37.28 |
| AT5G44770.1 | Thale cress | cytosol, nucleus, peroxisome | 36.82 | 36.41 |
| AT2G04500.1 | Thale cress | cytosol | 33.64 | 36.36 |
| AT4G14980.1 | Thale cress | cytosol | 36.82 | 36.15 |
| AT5G54030.1 | Thale cress | cytosol | 28.04 | 35.8 |
| AT4G11550.1 | Thale cress | cytosol | 43.55 | 34.88 |
| AT1G69150.1 | Thale cress | cytosol | 33.46 | 34.62 |
| AT5G40320.1 | Thale cress | nucleus | 38.32 | 34.51 |
| AT1G65180.1 | Thale cress | nucleus | 41.87 | 34.3 |
| AT4G11390.2 | Thale cress | cytosol | 34.95 | 34.25 |
| AT4G02190.1 | Thale cress | cytosol | 42.06 | 34.14 |
| AT4G01910.1 | Thale cress | cytosol | 41.5 | 34.1 |
| AT4G01920.1 | Thale cress | cytosol | 41.87 | 34.04 |
| AT5G54020.2 | Thale cress | nucleus | 37.2 | 33.84 |
| AT3G48400.1 | Thale cress | cytosol | 39.07 | 33.76 |
| AT4G01930.1 | Thale cress | cytosol | 41.12 | 33.74 |
| AT5G22355.1 | Thale cress | cytosol | 41.87 | 33.73 |
| AT4G01760.1 | Thale cress | cytosol | 42.06 | 33.73 |
| AT5G54050.1 | Thale cress | nucleus | 36.45 | 33.62 |
| AT5G54040.1 | Thale cress | cytosol | 37.2 | 33.39 |
| AT3G27480.1 | Thale cress | cytosol, nucleus, peroxisome | 37.38 | 33.11 |
| AT2G04680.1 | Thale cress | cytosol | 40.56 | 33.03 |
| AT5G37620.1 | Thale cress | cytosol | 40.19 | 32.98 |
| AT2G19660.2 | Thale cress | nucleus | 42.43 | 32.9 |
| AT3G43890.1 | Thale cress | cytosol | 40.19 | 32.53 |
| AT4G01740.1 | Thale cress | cytosol | 39.44 | 32.36 |
| AT3G28650.1 | Thale cress | cytosol | 40.0 | 32.18 |
| AT3G46810.1 | Thale cress | cytosol | 40.93 | 31.92 |
| AT3G46800.1 | Thale cress | cytosol | 40.56 | 31.82 |
| AT5G59940.1 | Thale cress | cytosol | 38.69 | 31.8 |
| AT5G29624.1 | Thale cress | cytosol | 28.97 | 31.76 |
| AT4G01350.1 | Thale cress | cytosol | 38.69 | 31.75 |
| AT5G59930.1 | Thale cress | cytosol, nucleus, plasma membrane | 38.5 | 31.4 |
| AT2G19650.1 | Thale cress | cytosol | 40.0 | 31.38 |
| AT3G27473.1 | Thale cress | cytosol | 38.5 | 31.12 |
| AT3G45530.1 | Thale cress | cytosol | 39.81 | 30.78 |
| AT3G27490.1 | Thale cress | cytosol | 38.32 | 30.06 |
| AT3G27500.1 | Thale cress | cytosol | 38.88 | 30.06 |
| AT5G59920.1 | Thale cress | cytosol | 39.63 | 29.86 |
| AT5G42840.1 | Thale cress | cytosol | 37.38 | 29.81 |
| AT3G45840.1 | Thale cress | mitochondrion, nucleus, peroxisome, vacuole | 31.78 | 28.76 |
| AT4G02180.1 | Thale cress | cytosol | 42.24 | 22.85 |
| KRG95394 | Soybean | nucleus | 24.11 | 22.75 |
| KRH67075 | Soybean | nucleus | 23.74 | 22.28 |
Protein Annotations
| EntrezGene:2745710 | MapMan:35.2 | ProteinID:AEE83681.1 | ArrayExpress:AT4G16015 | EnsemblPlantsGene:AT4G16015 | RefSeq:AT4G16015 |
| TAIR:AT4G16015 | RefSeq:AT4G16015-TAIR-G | EnsemblPlants:AT4G16015.1 | TAIR:AT4G16015.1 | ncoils:Coil | InterPro:DC1 |
| UniProt:F4JKZ3 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0035556 | InterPro:IPR002219 | RefSeq:NP_974557.1 | InterPro:PE/DAG-bd |
| PFAM:PF03107 | SMART:SM00109 | SUPFAM:SSF57889 | UniParc:UPI000034F1BA | : | : |
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:F4JKZ3]
Coordinates
chr4:+:9072908..9074809
Molecular Weight (calculated)
62000.5 Da
IEP (calculated)
6.457
GRAVY (calculated)
-0.307
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIIEGPKAH EHPLFLLPKM TMFTCHLCGL QDDRFPYACN LCNLSFHKDC AESTPEMKYS CHPKHILKRL TRVPRYTDGK CCLCENKLHY IFYHCSICNF
101: SVDINCAKNP LPSTIVHLKA HEHLLTLMPQ RNFVCDACGM DDDPNPYVCL PCNFMIHQNC IDKPSIIKIY RHDHRLYYNH CLDAGDWKCG VCNKEINWTC
201: GAYSCSKCPD FAIHPRCVKR FGIWDGIELE GIPENNVEVK SYEVIEEGEI RHFSHEKHNL KLQEESDANN ECMLCKACNY PIYSNSFYSC MECDDFILHK
301: KCADLPKKKI DPFYNMLTTL ITNDIRISIC NACQNVSQGF TYVSDDHKII LDVRCGSISE PFVHESHPLH SLYISRSTEE KFCIACGDKA TMVLSCEECD
401: FILDIKCSNL PKMVKHKNDK DHLLSLCYGE KTSEQYWCEI CEEALNAKKW FYSCDDCDIT FHIKCTLGDF VGMYQEAKDE SFQTYMILNN HINRPVCCCC
501: ESRCQFSSIL RFYGKLICSL QCLQKKFQEL HDDIS
101: SVDINCAKNP LPSTIVHLKA HEHLLTLMPQ RNFVCDACGM DDDPNPYVCL PCNFMIHQNC IDKPSIIKIY RHDHRLYYNH CLDAGDWKCG VCNKEINWTC
201: GAYSCSKCPD FAIHPRCVKR FGIWDGIELE GIPENNVEVK SYEVIEEGEI RHFSHEKHNL KLQEESDANN ECMLCKACNY PIYSNSFYSC MECDDFILHK
301: KCADLPKKKI DPFYNMLTTL ITNDIRISIC NACQNVSQGF TYVSDDHKII LDVRCGSISE PFVHESHPLH SLYISRSTEE KFCIACGDKA TMVLSCEECD
401: FILDIKCSNL PKMVKHKNDK DHLLSLCYGE KTSEQYWCEI CEEALNAKKW FYSCDDCDIT FHIKCTLGDF VGMYQEAKDE SFQTYMILNN HINRPVCCCC
501: ESRCQFSSIL RFYGKLICSL QCLQKKFQEL HDDIS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.