Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G01925.1 Thale cress cytosol 33.13 77.86
AT4G01930.1 Thale cress cytosol 73.1 73.77
AT4G01910.1 Thale cress cytosol 72.34 73.12
AT4G11540.1 Thale cress cytosol 55.47 69.52
AT4G01740.1 Thale cress cytosol 68.69 69.33
AT4G01760.1 Thale cress cytosol 68.54 67.62
CDY69979 Canola nucleus 65.35 67.5
CDY52787 Canola nucleus 64.59 67.35
CDY52789 Canola cytosol 41.03 66.5
CDY21921 Canola plastid 37.99 65.79
CDY65338 Canola cytosol 66.87 65.67
AT4G02190.1 Thale cress cytosol 65.5 65.4
AT4G11550.1 Thale cress cytosol 65.81 64.82
CDY22036 Canola cytosol 58.36 64.43
CDY22034 Canola endoplasmic reticulum 58.81 61.53
AT4G11390.2 Thale cress cytosol 46.05 55.49
AT1G65180.1 Thale cress nucleus 49.85 50.23
CDY50383 Canola cytosol 64.29 50.18
CDY22052 Canola nucleus 48.18 50.08
AT3G43890.1 Thale cress cytosol 48.78 48.56
AT4G02180.1 Thale cress cytosol 72.34 48.13
CDY22035 Canola cytosol 64.29 47.74
AT1G69150.1 Thale cress cytosol 37.08 47.2
AT1G58037.1 Thale cress cytosol 24.32 46.65
AT4G14980.1 Thale cress cytosol 36.02 43.49
AT5G22355.1 Thale cress cytosol 43.47 43.07
AT3G06990.1 Thale cress nucleus 34.95 42.67
AT5G44770.1 Thale cress cytosol, nucleus, peroxisome 34.95 42.51
AT3G27510.1 Thale cress cytosol 28.42 42.5
AT4G16015.1 Thale cress cytosol 34.04 41.87
AT2G04500.1 Thale cress cytosol 31.46 41.82
AT3G27480.1 Thale cress cytosol, nucleus, peroxisome 37.99 41.39
AT5G45730.1 Thale cress nucleus 35.11 41.25
CDY50382 Canola cytosol 62.01 41.13
AT3G46810.1 Thale cress cytosol 42.86 41.11
AT5G54050.1 Thale cress nucleus 36.02 40.86
AT3G46800.1 Thale cress cytosol 42.1 40.62
AT3G28650.1 Thale cress cytosol 41.03 40.6
AT3G07000.1 Thale cress cytosol 35.41 40.59
AT2G19660.2 Thale cress nucleus 42.55 40.58
AT5G37620.1 Thale cress cytosol 40.12 40.49
AT4G01350.1 Thale cress cytosol 39.97 40.34
AT5G54030.1 Thale cress cytosol 25.68 40.33
AT3G48400.1 Thale cress cytosol 37.84 40.23
AT5G40320.1 Thale cress nucleus 36.17 40.07
AT2G04680.1 Thale cress cytosol 39.97 40.03
AT3G27473.1 Thale cress cytosol 40.27 40.03
AT5G59940.1 Thale cress cytosol 39.21 39.63
AT5G59930.1 Thale cress cytosol, nucleus, plasma membrane 39.36 39.48
AT2G43220.1 Thale cress peroxisome 32.22 39.41
AT5G29624.1 Thale cress cytosol 28.72 38.73
AT5G54040.1 Thale cress cytosol 34.95 38.59
AT3G45530.1 Thale cress cytosol 40.58 38.58
AT5G59920.1 Thale cress cytosol 41.34 38.31
AT2G19650.1 Thale cress cytosol 39.67 38.27
AT3G27490.1 Thale cress cytosol 39.67 38.27
AT3G27500.1 Thale cress cytosol 39.97 38.01
AT5G54020.2 Thale cress nucleus 33.89 37.93
AT4G13992.1 Thale cress mitochondrion 36.93 37.85
AT5G42840.1 Thale cress cytosol 37.84 37.11
AT3G45840.1 Thale cress mitochondrion, nucleus, peroxisome, vacuole 31.61 35.19
KRG95394 Soybean nucleus 23.56 27.34
KRH67075 Soybean nucleus 23.25 26.84
Bra036288.1-P Field mustard cytosol, nucleus, plasma membrane 66.57 26.18
Protein Annotations
Gene3D:3.30.60.20MapMan:35.2EntrezGene:828197ProteinID:AAD22654.1ProteinID:AEE82099.1ArrayExpress:AT4G01920
EnsemblPlantsGene:AT4G01920RefSeq:AT4G01920TAIR:AT4G01920RefSeq:AT4G01920-TAIR-GEnsemblPlants:AT4G01920.1TAIR:AT4G01920.1
EMBL:AY064965EMBL:AY090320Unigene:At.28600ProteinID:CAB80685.1InterPro:DC1RefSeq:NP_192101.1
PFAM:PF03107PO:PO:0000013PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007103PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0009005PO:PO:0009009PO:PO:0009025PO:PO:0009029PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020137PO:PO:0025022UniProt:Q9SYI9
SUPFAM:SSF57889UniParc:UPI00000A4A25SEG:seg:::
Description
AT4g01920/T7B11_18 [Source:UniProtKB/TrEMBL;Acc:Q9SYI9]
Coordinates
chr4:-:828826..831288
Molecular Weight (calculated)
76087.7 Da
IEP (calculated)
7.592
GRAVY (calculated)
-0.339
Length
658 amino acids
Sequence
(BLAST)
001: MDSKGVLMPL IHEHLMMPWK NLKRGPCCGC CGRFEAISDG YYCKTCDFFV RKNCADEPSE YIKHPSHPKH TLQLLRPERP TNFCNLCGRM CPIFYRCDLC
101: DFDMDLYCSK YPPPEVIDIS KTHHHRLTLL KKWIKQCICA KCCKIIGNEF PYNCHECDLS FHVDCVWYPP ELELRLEVNH SYHSLHPLKL YAKGQLPDYS
201: DGKCRLCARK IDETFFFHCS PCNFTLDKVC VLRPPQQSLL NLKAHDHQLT LLPKLDSFTC NACGLKGDRS PYVCFQCGFM IHQDCLGLPR LININRHDHR
301: VSRTSVLGVV NSVCGVCRKK VDWSYGGFSC QRCHGYVVHS KCATRKDVWN GKELEGLPEE TEDIEPYVVI DENTIQHFSH KEHYLRLNVN GVLCDDNKRC
401: KACTHPICLQ SFYGCMDCNF ILHQNCAGFL RMKWHVLHNE RLTLVTNKDE GFRCYACDRL SNGFKYQHGN KAFDVRCISI SEPHIHPSHP NHPLYYFPSD
501: EVQWCTGCNM EQDFVLSCIE DNCGFLLCFG CATLPQMVKH RVHDHPLSLC YGEKASGKYW CDICEKETNP HTWFYTCKDH QASLHTKCVL GDLSSLMRRS
601: TIKIEGTSYE VVLNNSISRP FCSWCKMHCI FPIILKTLGA TNEYSCSLEC AECRYTDR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.