CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30007	Canola	cytosol, nucleus, plastid	64.76	64.66
CDX74184	Canola	plasma membrane	38.25	61.95
AT4G01350.1	Thale cress	cytosol	56.33	57.36
AT5G59940.1	Thale cress	cytosol	56.17	57.3
CDX74183	Canola	cytosol	29.52	56.98
CDY63290	Canola	cytosol	41.57	54.98
AT5G59920.1	Thale cress	cytosol	57.38	53.66
AT5G59930.1	Thale cress	cytosol, nucleus, plasma membrane	52.26	52.9
CDX88733	Canola	cytosol	48.64	51.76
CDY40661	Canola	cytosol	59.34	51.71
CDX71062	Canola	cytosol	48.64	51.6
CDY09238	Canola	cytosol	34.64	48.42
CDY09240	Canola	cytosol	34.49	48.21
CDX67463	Canola	cytosol	31.63	45.26
CDY41709	Canola	peroxisome	35.84	45.25
CDY52927	Canola	cytosol	24.25	42.71
CDY52787	Canola	nucleus	38.4	40.41
CDY48718	Canola	cytosol	22.44	40.16
CDY58516	Canola	nucleus	30.12	39.84
CDX93183	Canola	cytosol	39.91	39.79
CDY63456	Canola	cytosol	23.64	39.75
CDY69979	Canola	nucleus	38.1	39.72
CDY28703	Canola	cytosol	29.67	39.56
CDY22036	Canola	cytosol	35.24	39.26
CDX97701	Canola	cytosol	12.5	39.15
CDY51540	Canola	nucleus	30.12	38.99
CDY52789	Canola	cytosol	23.64	38.67
CDY65338	Canola	cytosol	39.01	38.66
CDY06776	Canola	cytosol	16.57	38.6
CDY63460	Canola	cytosol, mitochondrion	23.8	37.98
CDY21921	Canola	plastid	21.69	37.89
CDY30196	Canola	cytosol	23.19	37.65
CDY60784	Canola	cytosol	18.83	37.2
CDY36839	Canola	cytosol	33.43	36.69
CDY46706	Canola	mitochondrion	29.37	36.59
CDY22034	Canola	endoplasmic reticulum	34.64	36.57
CDY29992	Canola	cytosol	14.01	35.5
CDY44574	Canola	cytosol	25.45	35.06
CDY27940	Canola	cytosol	29.52	34.75
CDY43524	Canola	cytosol	26.2	34.39
CDY22883	Canola	cytosol	33.73	34.3
CDY27938	Canola	cytosol	22.59	34.17
CDY44167	Canola	cytosol	25.15	33.94
CDY21132	Canola	cytosol	31.17	33.82
CDY29993	Canola	cytosol	30.72	33.06
CDY42579	Canola	nucleus	13.1	31.75
CDY36353	Canola	plastid	14.76	31.41
CDY50383	Canola	cytosol	37.95	29.89
CDY22052	Canola	nucleus	27.11	28.44
CDY22035	Canola	cytosol	37.65	28.22
KRG95394	Soybean	nucleus	22.74	26.63
CDX82703	Canola	cytosol	38.25	26.32
KRH67075	Soybean	nucleus	21.99	25.61
CDY50382	Canola	cytosol	37.05	24.8

Protein Annotations

EnsemblPlants:CDY64703	EnsemblPlantsGene:GSBRNA2T00042575001	GO:A0A078JAW6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0046872	GO:GO:0047134	InterPro:DC1	InterPro:Znf_PHD	PFAM:PF03107	ProteinID:CDY64703
ProteinID:CDY64703.1	SMART:SM00249	SUPFAM:SSF57889	UniParc:UPI0004EDE6C8	UniProt:A0A078JAW6	MapMan:35.2

Description

BnaCnng44590DBnaCnng44590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JAW6]

Coordinates

chrLK034525:-:17197..19191

Molecular Weight (calculated)

75868.5 Da

IEP (calculated)

6.874

GRAVY (calculated)

-0.122

Length

664 amino acids

Sequence
(BLAST)

001: MDTTRTIYKL PIHEHPLFLS AQFVNSVPCD GCHVKGNKYG CYKCSEASCN CWFHKECAEA PPEINHHPSH PEHPLFLTDH SPTRDDTPCE ACGQKILSPC
101: YTCLTCEFKV DLICGIKPLA SAIEYPVSHD HPLALFKKRE EDKGPCEVCK ESIGGPFYSC LECNNIFFHV DCVHLSKEVN LPCHSTHPLK IITPESLIDD
201: DAERKCHFCV IQPENMLYHC SLCNFTLCLG CTKLPPPLVV DHTNTHTHPL RLFSSKIAFA CNVCGVLGYD NMLYLCLKCD FLVHIHCVGL PQVININRHD
301: HRISFTHHLG HGRAHCGVCR QSVKQYYGAY VCSICPNYAV HSQCAVDLTV WDGLELEGTP DISEDIAPFK VLGDNLICHF SHRGHNLLLV KDYVTVRDYY
401: EWFRCDACIC PIEFGPFYIC PICPFFLHAK CANLPTKKKL VFDPTPYKLE YLGVYLYCNL CKMISCGFVY ISQGFIKNYH YVDIHCGSIS EPFVHNGHFH
501: PLFFVTTKKD RHCNACKRVP DGYMLTCGAC GFYLCLYCAT LPEKIWHMSD EHPLILYYGE KANGKNWCEV CEMELDPSIW FFTCYEDCEV ALHVQCALGD
601: FSRLKPNWRF INKERIYKVV FNNHSSRPLC SNCHDRCKVP HILKEDDEQK NGYTCSMSCL KGLE

Best Arabidopsis Sequence Match ( AT5G59920.1 )
(BLAST)

001: MATEAVDLPI HEHPLFPSAR CIDDECDGCH VNGFMYAGYF CNEPYCYVWF HKDCAEAPGE ISHSSHPEHP LLLTNDSKDG PCDLCGQKLL TPCYSCPTCE
101: FKVDLTCGMK PSPPAIEHPL CHDHAVVFLK IREEKVPCEL CKESIEGPSY SCLECDMYFH VNCVHLSEEV NHPCHSIHPL KLITSESLTD DAEKSCLLCG
201: NIPAENMLYH CSVCNFTSCL GCTKNPPLLV IEHMKTHKHP LTLLPRRISC ICDVCGKKCQ FTAYVCLQCD FVTARKCIDR PRVININRHD HRIYLTHHLG
301: TGYSECGVCH KNVSQYKGAY SCSVCPNYAV HSTCAVRTDV WDGVELEGTT EITEDISPFK VVGDNLICHF SHEEHQLKLH KEDVIHDERR RCEACIHPVQ
401: FGSIYVCEEE ECCFVLHEKC ANLPMKKRLV FGTRPYTLMK ETTEITHCEL CGILSDGFAY SSHEWSDVDV HCGSLNEPLV HDGHIHPLYF AKKEEHTCDG
501: CQKSIEDYML RCKACDFDLC LYCATLPEKI WHRNDGHPLT LCCGEKEEAS GKYWCDICEK ELDPSIWFYT CYDCGVTLHA QCVLGDFSRL VLGQIYSFGE
601: KEIEFEAVPN NINTRPFCIQ CNSRCKVSVI LKILKDSEDG SDDGSDDVSD DVSDDPSNDV SDDTSDDDSD VVSDVVSDDA SNDDSDDTSD DHNGYICSRS
701: CLSSYLGEEI

Arabidopsis Description

ULI3Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q8W2D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.