Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09240 | Canola | cytosol | 99.58 | 99.58 |
| Bra020274.1-P | Field mustard | nucleus | 94.74 | 71.89 |
| CDX74183 | Canola | cytosol | 31.58 | 43.6 |
| CDX74184 | Canola | plasma membrane | 36.21 | 41.95 |
| CDX71062 | Canola | cytosol | 50.74 | 38.5 |
| CDX88733 | Canola | cytosol | 50.53 | 38.46 |
| CDX97701 | Canola | cytosol | 16.63 | 37.26 |
| CDY52927 | Canola | cytosol | 29.05 | 36.6 |
| CDY52789 | Canola | cytosol | 29.89 | 34.98 |
| CDY30007 | Canola | cytosol, nucleus, plastid | 48.84 | 34.89 |
| CDY64703 | Canola | cytosol | 48.42 | 34.64 |
| CDX67463 | Canola | cytosol | 33.68 | 34.48 |
| CDY63290 | Canola | cytosol | 36.21 | 34.26 |
| CDY06776 | Canola | cytosol | 19.79 | 32.98 |
| CDY63460 | Canola | cytosol, mitochondrion | 28.21 | 32.21 |
| CDY48718 | Canola | cytosol | 25.05 | 32.08 |
| CDY29992 | Canola | cytosol | 17.26 | 31.3 |
| CDY41709 | Canola | peroxisome | 34.53 | 31.18 |
| CDY40661 | Canola | cytosol | 48.21 | 30.05 |
| CDY21921 | Canola | plastid | 23.79 | 29.74 |
| CDY46706 | Canola | mitochondrion | 33.05 | 29.46 |
| CDY22036 | Canola | cytosol | 36.0 | 28.69 |
| CDY52787 | Canola | nucleus | 38.11 | 28.68 |
| CDY30196 | Canola | cytosol | 24.21 | 28.12 |
| CDY69979 | Canola | nucleus | 37.05 | 27.63 |
| CDX93183 | Canola | cytosol | 38.32 | 27.33 |
| CDY65338 | Canola | cytosol | 38.32 | 27.16 |
| CDY36839 | Canola | cytosol | 34.11 | 26.78 |
| CDY22034 | Canola | endoplasmic reticulum | 35.16 | 26.55 |
| CDY58516 | Canola | nucleus | 28.0 | 26.49 |
| CDY27940 | Canola | cytosol | 31.37 | 26.42 |
| CDY63456 | Canola | cytosol | 21.47 | 25.82 |
| CDY36353 | Canola | plastid | 16.84 | 25.64 |
| CDY51540 | Canola | nucleus | 27.58 | 25.54 |
| CDY28703 | Canola | cytosol | 26.53 | 25.3 |
| CDY22883 | Canola | cytosol | 34.74 | 25.27 |
| CDY42579 | Canola | nucleus | 14.53 | 25.18 |
| CDY22052 | Canola | nucleus | 33.47 | 25.12 |
| CDY44167 | Canola | cytosol | 23.79 | 22.97 |
| CDY60784 | Canola | cytosol | 16.21 | 22.92 |
| CDY50383 | Canola | cytosol | 40.21 | 22.66 |
| CDY44574 | Canola | cytosol | 22.32 | 21.99 |
| CDY21132 | Canola | cytosol | 28.0 | 21.73 |
| CDY27938 | Canola | cytosol | 19.79 | 21.41 |
| CDY29993 | Canola | cytosol | 27.58 | 21.23 |
| CDY43524 | Canola | cytosol | 22.53 | 21.15 |
| CDY22035 | Canola | cytosol | 38.11 | 20.43 |
| CDY50382 | Canola | cytosol | 38.95 | 18.65 |
| KRG95394 | Soybean | nucleus | 21.26 | 17.81 |
| CDX82703 | Canola | cytosol | 34.11 | 16.79 |
| KRH67075 | Soybean | nucleus | 20.0 | 16.67 |
Protein Annotations
| EnsemblPlants:CDY09238 | EnsemblPlantsGene:GSBRNA2T00001491001 | GO:A0A078FBH0 | InterPro:DC1 | InterPro:Znf_PHD | PFAM:PF03107 |
| ProteinID:CDY09238 | ProteinID:CDY09238.1 | SMART:SM00249 | SUPFAM:SSF57889 | UniParc:UPI0004EDB312 | UniProt:A0A078FBH0 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA02g06640DBnaA02g06640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FBH0]
Coordinates
chrLK031993:-:904024..905617
Molecular Weight (calculated)
54453.9 Da
IEP (calculated)
7.961
GRAVY (calculated)
-0.169
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGVYFCNKF GCSIWLHKEC TEAPLEINHP SHPQHPLMLN NYDDSSDQCV LCRGHLPPLR YTCFTCKITV DIACGMKPWP QVIEHPLCHS HPLIVKGNEV
101: SASCGVNHPC HSNHPLKLIA FDALTDDAEK TCILCANYPR NVCYHCFICD FTSCLRCTRR PPPLVVEDMK THQHQLLRIS KRISYACDVC GLKRDTQYYH
201: GSYICHQCDF IVHGMCIGLP RVISINRHDH RISFTYHIGP DYSKCGVCHR SISQHHGAYS CFVCPNYAVH SRCAIERDVW DGVELEGIPY VIEDVTPYKV
301: VSDGLISHVS HVEHPLKLHK GNILYEWIRC EACRDPVGFD SVFVCEKCCF LLHQKCANLP MKKKFIVDTE LYKLEVDKLR VASYCSECAT LSDGFKYSSH
401: DENRKVDVRC FSLSEPFVHA GHSHLLYFRK AYYRRSICDA CMKMRHGIGR MSILSFYVVT KKRVVKAGVT FVKDN
101: SASCGVNHPC HSNHPLKLIA FDALTDDAEK TCILCANYPR NVCYHCFICD FTSCLRCTRR PPPLVVEDMK THQHQLLRIS KRISYACDVC GLKRDTQYYH
201: GSYICHQCDF IVHGMCIGLP RVISINRHDH RISFTYHIGP DYSKCGVCHR SISQHHGAYS CFVCPNYAVH SRCAIERDVW DGVELEGIPY VIEDVTPYKV
301: VSDGLISHVS HVEHPLKLHK GNILYEWIRC EACRDPVGFD SVFVCEKCCF LLHQKCANLP MKKKFIVDTE LYKLEVDKLR VASYCSECAT LSDGFKYSSH
401: DENRKVDVRC FSLSEPFVHA GHSHLLYFRK AYYRRSICDA CMKMRHGIGR MSILSFYVVT KKRVVKAGVT FVKDN
001: MATTAVNLPI HEHPLYPSAR CIIGECDGCH VNGYMYNGYF CNEPFCFIWF HKECAEAPAE ISHSSHHQHP LLLTNDSIDG PCDLCGQKLL PPCYSCSTCE
101: FKVDLTCAMK PSPPAIEHPL CHHHSLVFLK KREEKVSCEL CKDSIAGPSY SCLECDVYFH VNCIQLSKEV NHPCHSAHPL KLIPFESLTD DAETTCLLCG
201: KKPAENMLYH CSVCNFTSCL GCTKNPPLLV IEHIKTHKHP LILFPRRIPC ICDICGKKCE FAVYVCPQCD FVTARGCIDL ARVININRHD HRIYLTHHLG
301: TGYSKCGVCH ENVNQYKGAY SCSVCPHYAV HSTCAVRTDV WDGVELEGTT EITEDNSPFK VVGDNLICHF SHEEHPLRFQ KDDVFIHDEH KRCAACIHPL
401: GFGSIYCCET CPFILHEKCA NLPMKKRLVF GTRPYTLMKE TTQLTDCTLC GIFSDGFAYS SRWLDVDVHC GSLNEPLVHD CHIHPLNFDK MEGHFCDGCK
501: KNIDDYMLRC KACDFDLCLY CATLPKKIWH RNDGHPLTLC CEEKEEASDK YWCDICEKEL DPSIWFYTCF DCGVTLHAQC VLGDFSRLVL GQNYWFGEKV
601: KFGAVPNNRN TRPLCIQCQS RCKVSVILKE RNEYNRYICS RSCLLSYLGE KI
101: FKVDLTCAMK PSPPAIEHPL CHHHSLVFLK KREEKVSCEL CKDSIAGPSY SCLECDVYFH VNCIQLSKEV NHPCHSAHPL KLIPFESLTD DAETTCLLCG
201: KKPAENMLYH CSVCNFTSCL GCTKNPPLLV IEHIKTHKHP LILFPRRIPC ICDICGKKCE FAVYVCPQCD FVTARGCIDL ARVININRHD HRIYLTHHLG
301: TGYSKCGVCH ENVNQYKGAY SCSVCPHYAV HSTCAVRTDV WDGVELEGTT EITEDNSPFK VVGDNLICHF SHEEHPLRFQ KDDVFIHDEH KRCAACIHPL
401: GFGSIYCCET CPFILHEKCA NLPMKKRLVF GTRPYTLMKE TTQLTDCTLC GIFSDGFAYS SRWLDVDVHC GSLNEPLVHD CHIHPLNFDK MEGHFCDGCK
501: KNIDDYMLRC KACDFDLCLY CATLPKKIWH RNDGHPLTLC CEEKEEASDK YWCDICEKEL DPSIWFYTCF DCGVTLHAQC VLGDFSRLVL GQNYWFGEKV
601: KFGAVPNNRN TRPLCIQCQS RCKVSVILKE RNEYNRYICS RSCLLSYLGE KI
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:F4JI14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.