Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52927 | Canola | cytosol | 25.18 | 64.46 |
| AT2G04680.1 | Thale cress | cytosol | 40.41 | 59.36 |
| CDY48718 | Canola | cytosol | 22.49 | 58.49 |
| AT5G37620.1 | Thale cress | cytosol | 38.96 | 57.67 |
| CDX93183 | Canola | cytosol | 38.55 | 55.86 |
| CDX97701 | Canola | cytosol | 10.47 | 47.64 |
| CDY52789 | Canola | cytosol | 18.76 | 44.58 |
| CDY30196 | Canola | cytosol | 18.34 | 43.28 |
| CDY63456 | Canola | cytosol | 17.51 | 42.78 |
| CDY29992 | Canola | cytosol | 11.61 | 42.75 |
| CDY41709 | Canola | peroxisome | 23.11 | 42.4 |
| CDX67463 | Canola | cytosol | 20.1 | 41.81 |
| CDY65338 | Canola | cytosol | 28.29 | 40.75 |
| CDY52787 | Canola | nucleus | 26.63 | 40.73 |
| CDY06776 | Canola | cytosol | 12.02 | 40.7 |
| CDY22036 | Canola | cytosol | 25.08 | 40.6 |
| CDY46706 | Canola | mitochondrion | 22.28 | 40.34 |
| CDY69979 | Canola | nucleus | 26.53 | 40.19 |
| CDX74184 | Canola | plasma membrane | 16.68 | 39.27 |
| CDY28703 | Canola | cytosol | 20.21 | 39.16 |
| CDY51540 | Canola | nucleus | 20.73 | 38.99 |
| CDY22034 | Canola | endoplasmic reticulum | 25.29 | 38.79 |
| CDY36839 | Canola | cytosol | 24.04 | 38.35 |
| CDY64703 | Canola | cytosol | 26.32 | 38.25 |
| CDY63460 | Canola | cytosol, mitochondrion | 16.37 | 37.98 |
| CDY60784 | Canola | cytosol | 13.06 | 37.5 |
| CDY58516 | Canola | nucleus | 19.27 | 37.05 |
| CDY27940 | Canola | cytosol | 21.55 | 36.88 |
| CDY63290 | Canola | cytosol | 19.17 | 36.85 |
| CDY30007 | Canola | cytosol, nucleus, plastid | 25.39 | 36.84 |
| CDX74183 | Canola | cytosol | 13.06 | 36.63 |
| CDY22883 | Canola | cytosol | 24.77 | 36.6 |
| CDX88733 | Canola | cytosol | 23.63 | 36.54 |
| CDX71062 | Canola | cytosol | 23.63 | 36.42 |
| CDY29993 | Canola | cytosol | 23.01 | 35.98 |
| CDY21921 | Canola | plastid | 13.89 | 35.26 |
| CDY44167 | Canola | cytosol | 17.93 | 35.16 |
| CDY43524 | Canola | cytosol | 18.34 | 34.98 |
| CDY21132 | Canola | cytosol | 22.18 | 34.97 |
| CDY27938 | Canola | cytosol | 15.54 | 34.17 |
| CDY09238 | Canola | cytosol | 16.79 | 34.11 |
| CDY09240 | Canola | cytosol | 16.68 | 33.89 |
| CDY22052 | Canola | nucleus | 21.97 | 33.49 |
| CDY44574 | Canola | cytosol | 16.58 | 33.2 |
| CDY40661 | Canola | cytosol | 25.91 | 32.81 |
| CDY22035 | Canola | cytosol | 29.53 | 32.17 |
| CDY50383 | Canola | cytosol | 27.88 | 31.91 |
| CDY42579 | Canola | nucleus | 8.81 | 31.02 |
| CDY50382 | Canola | cytosol | 27.36 | 26.61 |
| KRG95394 | Soybean | nucleus | 15.44 | 26.28 |
| CDY36353 | Canola | plastid | 8.39 | 25.96 |
| KRH67075 | Soybean | nucleus | 15.23 | 25.79 |
Protein Annotations
| MapMan:35.2 | GO:A0A078D625 | EnsemblPlants:CDX82703 | ProteinID:CDX82703 | ProteinID:CDX82703.1 | InterPro:DC1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0035556 | GO:GO:0047134 | EnsemblPlantsGene:GSBRNA2T00137969001 | InterPro:IPR002219 | InterPro:PE/DAG-bd | PFAM:PF03107 |
| SMART:SM00109 | SMART:SM00249 | SUPFAM:SSF57889 | UniParc:UPI0004EDF1C1 | InterPro:Znf_PHD | SEG:seg |
Description
BnaC07g01630D
Coordinates
chrLK031829:-:1478210..1491072
Molecular Weight (calculated)
111559.0 Da
IEP (calculated)
7.579
GRAVY (calculated)
-0.351
Length
965 amino acids
Sequence
(BLAST)
(BLAST)
001: MERVELPQLH EHPLIAFNRF AFSGCQVCSH FFSEFDVKAY GGYCCNELGC EEAVFHKECA KPLKEINHSF HPDHPLKLII PTFPLKYSQP HICFCGRVFK
101: VGYFCSLCDF KLDLECARRP EPLILLKNSY GHGHEHPLKL ICDCEPYFGI RWEFCKVCVK GLDPADPYYR CQECKEYSFH VDCVDFFPEA YHTSHPQHPL
201: KSLRGQVPDY ADKKCLLCEE EFDQLHHQFH HCDVCNFSIC RECIRHPPPI NVQCLKTHEH QLHLVPRLID FTCNACGMQG NRSPYFCLQC NFMIHRECID
301: LPRVININRH DHRVSYTPRL GHGEWKCKVC RKIVDGFYGA YSCSKCPAFA VHARCATRTG VWDMVEREGT PEEEEEIAPY EVIDDNTIRH FSHDHNLQLN
401: KDGMILSENT VCKACVFEIS SEPFYICKHQ QCDFILHEKC ANLPRKKRHV CNNLPFTLHT DSHFTFLCAL CDQYSTGSRY ESQPHVIILR FQIHLIMKAI
501: HILYTTTVHA TRRNTKGCRL CENEGNYLFS CDECDYTLNG KCALLPKKVM KKRYDDHPLF LSYGDMNVDE KYWCEACEKK VEPKEGFYTC NDCGVVLHIS
601: CLFGDFSYMM PVTRSNDEVV SNTSTSRPIC YVCNTRCKLP SVLKVSRNED VVFICSLKCR RHFKSDNVQP KTNCNGGYHC NELGCDKVLF HKECANPLRE
701: INHPSHPDHP LKLIIPTIPL QDSQPSTCFC GIKHVTTRKI CKVCQTYVNQ TASPHYKCQP CGFVIHVDCV CFSPEAYHTS HRQHPVNSLK CQVPDYADKK
801: CLLCAKIFDE QHHQLHHCDV CNLSICRACM KDPPPVHVEC LKTHEHQLHL VPRRINFTCN ACGTQGDRSP YFCLLCNYMI HRECIDLPCV ININRHDHHI
901: SYTPRLGHGE WKCKDCTVVS NTSICRPLCS VCNSRYKLPS ILKVCKGGVD KYVCSLKCCR ELFKE
101: VGYFCSLCDF KLDLECARRP EPLILLKNSY GHGHEHPLKL ICDCEPYFGI RWEFCKVCVK GLDPADPYYR CQECKEYSFH VDCVDFFPEA YHTSHPQHPL
201: KSLRGQVPDY ADKKCLLCEE EFDQLHHQFH HCDVCNFSIC RECIRHPPPI NVQCLKTHEH QLHLVPRLID FTCNACGMQG NRSPYFCLQC NFMIHRECID
301: LPRVININRH DHRVSYTPRL GHGEWKCKVC RKIVDGFYGA YSCSKCPAFA VHARCATRTG VWDMVEREGT PEEEEEIAPY EVIDDNTIRH FSHDHNLQLN
401: KDGMILSENT VCKACVFEIS SEPFYICKHQ QCDFILHEKC ANLPRKKRHV CNNLPFTLHT DSHFTFLCAL CDQYSTGSRY ESQPHVIILR FQIHLIMKAI
501: HILYTTTVHA TRRNTKGCRL CENEGNYLFS CDECDYTLNG KCALLPKKVM KKRYDDHPLF LSYGDMNVDE KYWCEACEKK VEPKEGFYTC NDCGVVLHIS
601: CLFGDFSYMM PVTRSNDEVV SNTSTSRPIC YVCNTRCKLP SVLKVSRNED VVFICSLKCR RHFKSDNVQP KTNCNGGYHC NELGCDKVLF HKECANPLRE
701: INHPSHPDHP LKLIIPTIPL QDSQPSTCFC GIKHVTTRKI CKVCQTYVNQ TASPHYKCQP CGFVIHVDCV CFSPEAYHTS HRQHPVNSLK CQVPDYADKK
801: CLLCAKIFDE QHHQLHHCDV CNLSICRACM KDPPPVHVEC LKTHEHQLHL VPRRINFTCN ACGTQGDRSP YFCLLCNYMI HRECIDLPCV ININRHDHHI
901: SYTPRLGHGE WKCKDCTVVS NTSICRPLCS VCNSRYKLPS ILKVCKGGVD KYVCSLKCCR ELFKE
001: MEIVEVSPIH KHPLLPITRF SREHCKCNVC GSVGYIYGGY CCNEVGCESM FHKECVESLS EIKHTSHPDH PLKLLISDKA SFCSRCEGRF ENGYICSICD
101: FKLDFRCAKG PAPLLILEKS NLHEHLLEFF VGWHSWKGHR ECKACGGAGF RGYRWYGCYQ CDTLFHGECA EFFPEAKHTS HPQHTLKHIT SEEAPDYADN
201: KCLLCEEEFD QQHPKIHHCD VCNFTICRAC MKNAPPVRIE SLTTHEHQLH LVPRRIDFTC NACGTLGDRS PYFCLQCNFM IHRQCIDLPR VININRHDHR
301: ISYTRRLGHG EWKCKVCRKK VDGFYGAYTC LKCPSFVVHS LCATRNDVWD MIELEGMQEE EEIAPYEMID ANTIKHFSHD HNLQINNDGH GRIQPENIVC
401: EACVFQILSE PFYSCNQCSF ILHEKCANHP RKKRHVCNNT SFILFTDSCN KANASCGLCK QHFTGFRYES GPYVTIDVRC AAILDTIEHG SHQHPLYYYT
501: TFDWKPCSRC REEGAVLFRC DECDYILDGN CALFPKKVMR NRYDDHLLFL SFGDKNVSGD YWCEACETKV NPKEWFYTCN DCGTILHISC VVGDFSYIMP
601: GSHITTWRAN VVSNTSICRP VCYMCNSRCK LPSVLKLSDT KVDVYLCSFK CAYFIRK
101: FKLDFRCAKG PAPLLILEKS NLHEHLLEFF VGWHSWKGHR ECKACGGAGF RGYRWYGCYQ CDTLFHGECA EFFPEAKHTS HPQHTLKHIT SEEAPDYADN
201: KCLLCEEEFD QQHPKIHHCD VCNFTICRAC MKNAPPVRIE SLTTHEHQLH LVPRRIDFTC NACGTLGDRS PYFCLQCNFM IHRQCIDLPR VININRHDHR
301: ISYTRRLGHG EWKCKVCRKK VDGFYGAYTC LKCPSFVVHS LCATRNDVWD MIELEGMQEE EEIAPYEMID ANTIKHFSHD HNLQINNDGH GRIQPENIVC
401: EACVFQILSE PFYSCNQCSF ILHEKCANHP RKKRHVCNNT SFILFTDSCN KANASCGLCK QHFTGFRYES GPYVTIDVRC AAILDTIEHG SHQHPLYYYT
501: TFDWKPCSRC REEGAVLFRC DECDYILDGN CALFPKKVMR NRYDDHLLFL SFGDKNVSGD YWCEACETKV NPKEWFYTCN DCGTILHISC VVGDFSYIMP
601: GSHITTWRAN VVSNTSICRP VCYMCNSRCK LPSVLKLSDT KVDVYLCSFK CAYFIRK
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJ91]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.