Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29992 | Canola | cytosol | 33.06 | 77.86 |
| CDY21132 | Canola | cytosol | 69.69 | 70.26 |
| AT2G43220.1 | Thale cress | peroxisome | 45.54 | 52.23 |
| CDX97701 | Canola | cytosol | 16.05 | 46.7 |
| CDY06776 | Canola | cytosol | 18.96 | 41.05 |
| CDY30196 | Canola | cytosol | 27.07 | 40.83 |
| CDY63456 | Canola | cytosol | 26.09 | 40.76 |
| CDY60784 | Canola | cytosol | 21.88 | 40.18 |
| CDY28703 | Canola | cytosol | 31.93 | 39.56 |
| CDY51540 | Canola | nucleus | 32.74 | 39.38 |
| CDY63290 | Canola | cytosol | 30.47 | 37.45 |
| CDY21921 | Canola | plastid | 23.01 | 37.37 |
| CDY41709 | Canola | peroxisome | 31.77 | 37.26 |
| CDY52787 | Canola | nucleus | 36.95 | 36.13 |
| CDY52927 | Canola | cytosol | 21.88 | 35.81 |
| CDY58516 | Canola | nucleus | 29.01 | 35.66 |
| CDX93183 | Canola | cytosol | 38.41 | 35.59 |
| CDY48718 | Canola | cytosol | 21.39 | 35.58 |
| CDY69979 | Canola | nucleus | 36.63 | 35.48 |
| CDY22036 | Canola | cytosol | 33.71 | 34.9 |
| CDY36839 | Canola | cytosol | 33.71 | 34.38 |
| CDY46706 | Canola | mitochondrion | 29.66 | 34.33 |
| CDY27940 | Canola | cytosol | 31.12 | 34.04 |
| CDY65338 | Canola | cytosol | 36.95 | 34.03 |
| CDY52789 | Canola | cytosol | 21.88 | 33.25 |
| CDY22034 | Canola | endoplasmic reticulum | 33.06 | 32.43 |
| CDX74183 | Canola | cytosol | 17.83 | 31.98 |
| CDY44167 | Canola | cytosol | 25.45 | 31.91 |
| CDY27938 | Canola | cytosol | 22.37 | 31.44 |
| CDY64703 | Canola | cytosol | 33.06 | 30.72 |
| CDY63460 | Canola | cytosol, mitochondrion | 20.58 | 30.53 |
| CDY43524 | Canola | cytosol | 24.8 | 30.24 |
| CDY22883 | Canola | cytosol | 31.6 | 29.86 |
| CDX67463 | Canola | cytosol | 22.2 | 29.53 |
| CDX71062 | Canola | cytosol | 29.82 | 29.39 |
| CDY44574 | Canola | cytosol | 22.85 | 29.25 |
| CDX88733 | Canola | cytosol | 29.5 | 29.17 |
| CDY30007 | Canola | cytosol, nucleus, plastid | 30.15 | 27.97 |
| CDY09240 | Canola | cytosol | 21.39 | 27.79 |
| CDY09238 | Canola | cytosol | 21.23 | 27.58 |
| CDX74184 | Canola | plasma membrane | 18.31 | 27.56 |
| CDY40661 | Canola | cytosol | 33.87 | 27.43 |
| CDY36353 | Canola | plastid | 13.78 | 27.24 |
| CDY50383 | Canola | cytosol | 36.63 | 26.81 |
| CDY22052 | Canola | nucleus | 26.74 | 26.07 |
| CDY22035 | Canola | cytosol | 36.95 | 25.73 |
| CDY42579 | Canola | nucleus | 10.37 | 23.36 |
| KRG95394 | Soybean | nucleus | 21.23 | 23.1 |
| CDX82703 | Canola | cytosol | 35.98 | 23.01 |
| CDY50382 | Canola | cytosol | 35.66 | 22.18 |
| KRH67075 | Soybean | nucleus | 20.1 | 21.75 |
Protein Annotations
| MapMan:35.2 | GO:A0A078GZF5 | UniProt:A0A078GZF5 | EnsemblPlants:CDY29993 | ProteinID:CDY29993 | ProteinID:CDY29993.1 |
| InterPro:DC1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0035556 |
| GO:GO:0046872 | GO:GO:0047134 | EnsemblPlantsGene:GSBRNA2T00044516001 | InterPro:IPR002219 | InterPro:PE/DAG-bd | PFAM:PF03107 |
| PFscan:PS50081 | PANTHER:PTHR32410 | SMART:SM00109 | SUPFAM:SSF57889 | UniParc:UPI0004EE18B7 | SEG:seg |
Description
BnaC01g40150DBnaC01g40150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZF5]
Coordinates
chrLK032247:-:338645..340561
Molecular Weight (calculated)
71107.8 Da
IEP (calculated)
6.941
GRAVY (calculated)
-0.385
Length
617 amino acids
Sequence
(BLAST)
(BLAST)
001: MIRNDTHFWS PAHSDGLSES DLSKIHDTIK KRNLYHIPRL NFCCDCLERI EDDDFRSGCN SCGKQWHLRC IPSSPAVINH PFHAYHPLEL LIDVPPEHSK
101: GKCDACKEEL KSYFYHCSLC NFSMHVRCSR NPPPPKVKTS KCHERELFCM VRNDTFTCNA CGTHGERCPY VCAPCGVMFH RECIDLPHVI NINRHDHRVS
201: HTYSLGFGNW KCMICHKMVD WRYGAYSCST CPDYVVHSKC ATRVDVWDGE ELEGVPEETF VVSPFREIEK GLTIEHFSHK DHFLIKIDEE DDILDVSIRC
301: EACVRPIFSE THYKCMQCDD FFIHETCANL PLRKRHWLST KPFYLNANKD ESKSLFRCDA CETTSNGFKY ESEGPEGVIS LDIRCAFVIS SVSLECHTHT
401: LFLTTMDRGT CGGCKVSEQY VLRCTESECE CDFSLCLACA TLPEKIKRKG DEHFLFLRHG EKASGKYWCE VCEAVLDPRE EWFYTCDVSG VTFHIKCVVG
501: EFPNAKPGFT YHYHCAEKIE LVHNNRITRP NCATCGSRCL RPLILKLKLV NTYEVYCCDV KCSLQFLMNT TKKYQDLHKK MYGETSWPSG QSFVVSTSNP
601: GIRFSDNTVI LRLQDRM
101: GKCDACKEEL KSYFYHCSLC NFSMHVRCSR NPPPPKVKTS KCHERELFCM VRNDTFTCNA CGTHGERCPY VCAPCGVMFH RECIDLPHVI NINRHDHRVS
201: HTYSLGFGNW KCMICHKMVD WRYGAYSCST CPDYVVHSKC ATRVDVWDGE ELEGVPEETF VVSPFREIEK GLTIEHFSHK DHFLIKIDEE DDILDVSIRC
301: EACVRPIFSE THYKCMQCDD FFIHETCANL PLRKRHWLST KPFYLNANKD ESKSLFRCDA CETTSNGFKY ESEGPEGVIS LDIRCAFVIS SVSLECHTHT
401: LFLTTMDRGT CGGCKVSEQY VLRCTESECE CDFSLCLACA TLPEKIKRKG DEHFLFLRHG EKASGKYWCE VCEAVLDPRE EWFYTCDVSG VTFHIKCVVG
501: EFPNAKPGFT YHYHCAEKIE LVHNNRITRP NCATCGSRCL RPLILKLKLV NTYEVYCCDV KCSLQFLMNT TKKYQDLHKK MYGETSWPSG QSFVVSTSNP
601: GIRFSDNTVI LRLQDRM
001: MAKTLDLFWH EHPLYEKYRM FTCQECHRSA IPFFEVFYGC FRCNIKWHPY CVPRSTKNIN HPCHPNHPLE VLLQGPPSYS DEKCSLCQRK LSNFVYHCKL
101: CNFSIDMECG NRPPPHKVDH PKCHEHALTL MGREVSFTCN ACGTHGERNP YVCLPCSVMF HYDCIDLPHV ININRHDHRI SHSYPLKRGN WVCEICRQDI
201: NTTYGGYSCN KCPDFFVHSK CATRKDVWDG TELEGIPEEV VDVAPFEVIE EGVIYHFSHE KHNLFLIEDV FIDGAEDMHC EACARPVSSE KHYKCVECKF
301: ILHEECANLP LTKRHGLSTG IFYLRFGKDF SEQNFSCDAC NRDGRGFSYK DEEGVVLDVL CASLSFFKHP KLHPHTLFLT TIDRGTCLAC GENKLNVLRC
401: VDCDYSLDYK CATLPLVIKH RCDTHYLVLR SGEEAPEGKY WCEICEAETN PERWFYTCDD CGVVCHIECV TGDFLNIKPG IIMKNRENKF EVGFNDHDSR
501: PKCTDCGSRC RFPRFFKVTR KNIEYYYCSK ACFQNAKF
101: CNFSIDMECG NRPPPHKVDH PKCHEHALTL MGREVSFTCN ACGTHGERNP YVCLPCSVMF HYDCIDLPHV ININRHDHRI SHSYPLKRGN WVCEICRQDI
201: NTTYGGYSCN KCPDFFVHSK CATRKDVWDG TELEGIPEEV VDVAPFEVIE EGVIYHFSHE KHNLFLIEDV FIDGAEDMHC EACARPVSSE KHYKCVECKF
301: ILHEECANLP LTKRHGLSTG IFYLRFGKDF SEQNFSCDAC NRDGRGFSYK DEEGVVLDVL CASLSFFKHP KLHPHTLFLT TIDRGTCLAC GENKLNVLRC
401: VDCDYSLDYK CATLPLVIKH RCDTHYLVLR SGEEAPEGKY WCEICEAETN PERWFYTCDD CGVVCHIECV TGDFLNIKPG IIMKNRENKF EVGFNDHDSR
501: PKCTDCGSRC RFPRFFKVTR KNIEYYYCSK ACFQNAKF
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZW73]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.