Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G21830.1 | Thale cress | cytosol | 35.9 | 36.03 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | GO:A0A078FHJ3 | UniProt:A0A078FHJ3 | EnsemblPlants:CDY12656 | ProteinID:CDY12656 |
| ProteinID:CDY12656.1 | ncoils:Coil | InterPro:DC1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0035556 | GO:GO:0046872 | GO:GO:0047134 | EnsemblPlantsGene:GSBRNA2T00070174001 | InterPro:IPR002219 |
| InterPro:IPR013083 | InterPro:PE/DAG-bd | PFAM:PF03107 | PFscan:PS50081 | PANTHER:PTHR32410 | SMART:SM00109 |
| SUPFAM:SSF57889 | UniParc:UPI0004EDCD30 | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
BnaA02g13240DBnaA02g13240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHJ3]
Coordinates
chrLK032025:-:551875..554526
Molecular Weight (calculated)
65452.6 Da
IEP (calculated)
6.963
GRAVY (calculated)
-0.296
Length
571 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKLKHGAHE SCSKLPLECK DCEIFLDLGC AILNNTKTSW YAEEKLHYSH AHFLRRCKPG PDARGSCLMC ELPLTPSAVS YGCSQCYLFA HERCLDLPRE
101: IQHPVHQAHP LTRLDFTHTC GGGKVCDACG LHVEGAPLSC LECSFYLHLR CADSLLRGLV HKSHQHKLFY LANNAKLRFK NGCRVCMRDD DGSYGDYLYH
201: CVECGWRSHF KCLEIPESVV NKSYHIHPLV CKIFLSEDDS LEYCDVCETM VHAGHHAYCC EECGFLSHIE CILHEEMPSP LYLKDLYSHL GEKLTRPADH
301: DDKCETKELE NKLVVRLAML RRLRKDAGYV IGFTNMRCDT CKEKIDYFNL FCRICDFIIC TKCACIELWR RYRALENHPL HYNHILYMTS RKTGSKCTAC
401: KPDIDISKYV FFCSTCSLSF HFKCIQAVGI STRIKTHKHC LYNFLSDDSS RPCTICNKPC GASFYACDIC NVCAHEECIG FPTYVKNQRH QHIVNLKKIY
501: APKICSICGL DTKFSGHKYQ YTCDDCKDVF HTNCIMSMVE REAATEEEQI SDLSNMLKDM DESDEEDSDS S
101: IQHPVHQAHP LTRLDFTHTC GGGKVCDACG LHVEGAPLSC LECSFYLHLR CADSLLRGLV HKSHQHKLFY LANNAKLRFK NGCRVCMRDD DGSYGDYLYH
201: CVECGWRSHF KCLEIPESVV NKSYHIHPLV CKIFLSEDDS LEYCDVCETM VHAGHHAYCC EECGFLSHIE CILHEEMPSP LYLKDLYSHL GEKLTRPADH
301: DDKCETKELE NKLVVRLAML RRLRKDAGYV IGFTNMRCDT CKEKIDYFNL FCRICDFIIC TKCACIELWR RYRALENHPL HYNHILYMTS RKTGSKCTAC
401: KPDIDISKYV FFCSTCSLSF HFKCIQAVGI STRIKTHKHC LYNFLSDDSS RPCTICNKPC GASFYACDIC NVCAHEECIG FPTYVKNQRH QHIVNLKKIY
501: APKICSICGL DTKFSGHKYQ YTCDDCKDVF HTNCIMSMVE REAATEEEQI SDLSNMLKDM DESDEEDSDS S
001: MGKLEHFSHS CPLTSPEIVA EGICNICFQD QVVEYACKPC NFDICKTCSK LPQKVSHGFH SDHPLEFSLF QYDRKPGYIV CSCCGNMSSC SFYECKECEI
101: YLDLGCALLK NVFTGWDVRE MLHYSHEHLL RRCKPGQDAR GSCLLCELPL SPSSICYGCV YCYSFLHERC LDLPTEIRHP VHLEHPLRRL DYIRSGGRTF
201: CGACREKIDS VPFGCLECGF YIHMRCADSF LRCLMHESHE HKLFYVSSNA KEHFGRNNCC QICLGAVVSS LDSYYHCIEC ELEFHFECLG ISKTISKRSC
301: HIHPLVCKRV REEDDSLEYC GVCETLIHAG HHVYSCEECD FLGHIECILR EKEPSPLYLK DLYSCVEDVK RATNQEDYET NKVMVHDINH NHVVTSIDMC
401: ELEGKEHCHI CEKEILGNPW KCETCNFVTH NFCVELGKPS RHRFHWNHLL TLMPKPVATD MTSCKSCRED IKGFNLFCRI CNFIIHVSCA MKGKRFLGMT
501: GPKVVGTWRG RCLGGKHRMV QVMFPRSYQK VCIICHERVL GKAVSCMECE TIYHLRCIDR HRIKDRDSS
101: YLDLGCALLK NVFTGWDVRE MLHYSHEHLL RRCKPGQDAR GSCLLCELPL SPSSICYGCV YCYSFLHERC LDLPTEIRHP VHLEHPLRRL DYIRSGGRTF
201: CGACREKIDS VPFGCLECGF YIHMRCADSF LRCLMHESHE HKLFYVSSNA KEHFGRNNCC QICLGAVVSS LDSYYHCIEC ELEFHFECLG ISKTISKRSC
301: HIHPLVCKRV REEDDSLEYC GVCETLIHAG HHVYSCEECD FLGHIECILR EKEPSPLYLK DLYSCVEDVK RATNQEDYET NKVMVHDINH NHVVTSIDMC
401: ELEGKEHCHI CEKEILGNPW KCETCNFVTH NFCVELGKPS RHRFHWNHLL TLMPKPVATD MTSCKSCRED IKGFNLFCRI CNFIIHVSCA MKGKRFLGMT
501: GPKVVGTWRG RCLGGKHRMV QVMFPRSYQK VCIICHERVL GKAVSCMECE TIYHLRCIDR HRIKDRDSS
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJ16]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.