Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002588.1-P | Field mustard | cytosol | 98.96 | 98.96 |
| CDX80298 | Canola | cytosol | 98.96 | 98.96 |
| AT5G59140.1 | Thale cress | cytosol | 98.96 | 98.96 |
| CDX71133 | Canola | cytosol | 97.92 | 97.92 |
| CDX88684 | Canola | cytosol | 97.92 | 97.92 |
| GSMUA_Achr6P14940_001 | Banana | cytosol, mitochondrion, peroxisome | 65.62 | 85.14 |
| PGSC0003DMT400077993 | Potato | cytosol | 81.25 | 79.59 |
| KRH23113 | Soybean | cytosol | 80.21 | 78.57 |
| VIT_06s0004g05560.t01 | Wine grape | cytosol | 80.21 | 78.57 |
| KRH10213 | Soybean | cytosol | 79.17 | 77.55 |
| Solyc06g076460.2.1 | Tomato | cytosol | 57.29 | 67.07 |
| EER88159 | Sorghum | cytosol | 72.92 | 60.87 |
| TraesCS4A01G179700.1 | Wheat | cytosol, nucleus | 73.96 | 59.17 |
| TraesCS4B01G139800.1 | Wheat | cytosol | 73.96 | 59.17 |
| Os11t0707700-01 | Rice | cytosol | 75.0 | 58.06 |
| Zm00001d044753_P001 | Maize | nucleus | 72.92 | 48.95 |
| Zm00001d037277_P001 | Maize | cytosol | 59.38 | 39.58 |
| TraesCS4D01G134500.1 | Wheat | cytosol | 58.33 | 37.09 |
Protein Annotations
| EnsemblPlants:CDY33015 | EnsemblPlantsGene:GSBRNA2T00053239001 | Gene3D:3.30.710.10 | GO:A0A078H346 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | InterPro:SKP1-like | InterPro:SKP1/BTB/POZ_sf |
| InterPro:Skp1_comp_POZ | PANTHER:PTHR20648 | PFAM:PF03931 | ProteinID:CDY33015 | ProteinID:CDY33015.1 | SMART:SM00512 |
| SUPFAM:SSF54695 | UniParc:UPI0004EDBFDB | UniProt:A0A078H346 | MapMan:35.2 | : | : |
Description
BnaA10g12210DBnaA10g12210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H346]
Coordinates
chrLK032304:+:258625..259861
Molecular Weight (calculated)
11068.3 Da
IEP (calculated)
4.487
GRAVY (calculated)
-0.090
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MRETVKLISM EGFEFVIDRE AAMVSQTIRS MLTSPGGFSE SKEGVVTFPD ISTTILEKIC QYFYWSLQYS RGKETEFHIE PELTLELMMA ANYLHT
1: MRETVKLISM EGFEFVIDRE AAMVSQTIRS MLTSPGGFSE SKDGVVTFPD ISTTILEKIC QYFYWSLQYS RGKETEFHIE PELTLELMMA ANYLHT
Arabidopsis Description
BTB/POZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FIG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.