Subcellular Localization
min:
: max
Winner_takes_all: cytosol, peroxisome, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 3
- peroxisome 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400077993 | Potato | cytosol | 91.89 | 69.39 |
| Bra006730.1-P | Field mustard | cytosol | 85.14 | 65.62 |
| CDX71133 | Canola | cytosol | 85.14 | 65.62 |
| CDX80298 | Canola | cytosol | 85.14 | 65.62 |
| CDX88684 | Canola | cytosol | 85.14 | 65.62 |
| CDY33015 | Canola | cytosol | 85.14 | 65.62 |
| AT5G59140.1 | Thale cress | cytosol | 85.14 | 65.62 |
| Bra002588.1-P | Field mustard | cytosol | 83.78 | 64.58 |
| KRH23113 | Soybean | cytosol | 85.14 | 64.29 |
| KRH10213 | Soybean | cytosol | 83.78 | 63.27 |
| VIT_06s0004g05560.t01 | Wine grape | cytosol | 83.78 | 63.27 |
| Solyc06g076460.2.1 | Tomato | cytosol | 58.11 | 52.44 |
| EER88159 | Sorghum | cytosol | 81.08 | 52.17 |
| Os11t0707700-01 | Rice | cytosol | 83.78 | 50.0 |
| TraesCS4A01G179700.1 | Wheat | cytosol, nucleus | 81.08 | 50.0 |
| TraesCS4B01G139800.1 | Wheat | cytosol | 81.08 | 50.0 |
| Zm00001d044753_P001 | Maize | nucleus | 81.08 | 41.96 |
| Zm00001d037277_P001 | Maize | cytosol | 58.11 | 29.86 |
| TraesCS4D01G134500.1 | Wheat | cytosol | 58.11 | 28.48 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P14940_001 | EnsemblPlants:GSMUA_Achr6T14940_001 | EnsemblPlantsGene:GSMUA_Achr6G14940_001 | Gene3D:3.30.710.10 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | InterPro:SKP1/BTB/POZ_sf | PANTHER:PTHR20648 | SUPFAM:SSF54695 |
| UniParc:UPI0002968EEA | UniProt:M0T742 | MapMan:35.2 | : | : | : |
Description
Putative Transcription elongation factor B polypeptide 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G14940_001]
Coordinates
chr6:+:9924577..9928282
Molecular Weight (calculated)
8518.2 Da
IEP (calculated)
4.424
GRAVY (calculated)
-0.189
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: MVSQTIRNML TSPGGFAETQ HGQVTFPEIS TPILEKICQY FYWSLEYSSG KETEFHIEPE ITLELMMAAN YLHT
1: MRETVKLISM EGFEFVIDRE AAMVSQTIRS MLTSPGGFSE SKDGVVTFPD ISTTILEKIC QYFYWSLQYS RGKETEFHIE PELTLELMMA ANYLHT
Arabidopsis Description
BTB/POZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FIG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.