Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80298 | Canola | cytosol | 100.0 | 100.0 |
| Bra006730.1-P | Field mustard | cytosol | 98.96 | 98.96 |
| CDX71133 | Canola | cytosol | 98.96 | 98.96 |
| CDX88684 | Canola | cytosol | 98.96 | 98.96 |
| CDY33015 | Canola | cytosol | 98.96 | 98.96 |
| Bra002588.1-P | Field mustard | cytosol | 97.92 | 97.92 |
| GSMUA_Achr6P14940_001 | Banana | cytosol, mitochondrion, peroxisome | 65.62 | 85.14 |
| PGSC0003DMT400077993 | Potato | cytosol | 81.25 | 79.59 |
| KRH23113 | Soybean | cytosol | 80.21 | 78.57 |
| VIT_06s0004g05560.t01 | Wine grape | cytosol | 80.21 | 78.57 |
| KRH10213 | Soybean | cytosol | 79.17 | 77.55 |
| Solyc06g076460.2.1 | Tomato | cytosol | 57.29 | 67.07 |
| EER88159 | Sorghum | cytosol | 72.92 | 60.87 |
| TraesCS4A01G179700.1 | Wheat | cytosol, nucleus | 72.92 | 58.33 |
| TraesCS4B01G139800.1 | Wheat | cytosol | 72.92 | 58.33 |
| Os11t0707700-01 | Rice | cytosol | 73.96 | 57.26 |
| Zm00001d044753_P001 | Maize | nucleus | 72.92 | 48.95 |
| Zm00001d037277_P001 | Maize | cytosol | 59.38 | 39.58 |
| TraesCS4D01G134500.1 | Wheat | cytosol | 57.29 | 36.42 |
Protein Annotations
| Gene3D:3.30.710.10 | MapMan:35.2 | EntrezGene:836032 | ProteinID:AED97148.1 | ArrayExpress:AT5G59140 | EnsemblPlantsGene:AT5G59140 |
| RefSeq:AT5G59140 | TAIR:AT5G59140 | RefSeq:AT5G59140-TAIR-G | EnsemblPlants:AT5G59140.1 | TAIR:AT5G59140.1 | EMBL:AY045995 |
| EMBL:AY096614 | ProteinID:BAB09760.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0006139 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0032968 |
| GO:GO:0042787 | GO:GO:0070449 | RefSeq:NP_568900.1 | PFAM:PF03931 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR20648 | UniProt:Q9FIG0 |
| InterPro:SKP1-like | InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 | SUPFAM:SSF54695 | InterPro:Skp1_comp_POZ | UniParc:UPI00000A381E |
Description
BTB/POZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FIG0]
Coordinates
chr5:-:23874311..23875713
Molecular Weight (calculated)
11054.3 Da
IEP (calculated)
4.474
GRAVY (calculated)
-0.090
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MRETVKLISM EGFEFVIDRE AAMVSQTIRS MLTSPGGFSE SKDGVVTFPD ISTTILEKIC QYFYWSLQYS RGKETEFHIE PELTLELMMA ANYLHT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.