Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER88159 | Sorghum | cytosol | 69.23 | 86.09 |
| GSMUA_Achr6P14940_001 | Banana | cytosol, mitochondrion, peroxisome | 41.96 | 81.08 |
| TraesCS4A01G179700.1 | Wheat | cytosol, nucleus | 64.34 | 76.67 |
| TraesCS4B01G139800.1 | Wheat | cytosol | 64.34 | 76.67 |
| PGSC0003DMT400077993 | Potato | cytosol | 51.05 | 74.49 |
| Os11t0707700-01 | Rice | cytosol | 63.64 | 73.39 |
| CDX80298 | Canola | cytosol | 48.95 | 72.92 |
| CDY33015 | Canola | cytosol | 48.95 | 72.92 |
| AT5G59140.1 | Thale cress | cytosol | 48.95 | 72.92 |
| KRH23113 | Soybean | cytosol | 49.65 | 72.45 |
| VIT_06s0004g05560.t01 | Wine grape | cytosol | 49.65 | 72.45 |
| Bra002588.1-P | Field mustard | cytosol | 48.25 | 71.88 |
| Bra006730.1-P | Field mustard | cytosol | 48.25 | 71.88 |
| CDX71133 | Canola | cytosol | 48.25 | 71.88 |
| CDX88684 | Canola | cytosol | 48.25 | 71.88 |
| KRH10213 | Soybean | cytosol | 48.25 | 70.41 |
| Solyc06g076460.2.1 | Tomato | cytosol | 36.36 | 63.41 |
| Zm00001d037277_P001 | Maize | cytosol | 59.44 | 59.03 |
| TraesCS4D01G134500.1 | Wheat | cytosol | 49.65 | 47.02 |
Protein Annotations
| MapMan:35.2 | UniProt:A0A1D6NR85 | ProteinID:AQL00819.1 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | PANTHER:PTHR20648 | PANTHER:PTHR20648:SF0 | InterPro:SKP1-like |
| InterPro:SKP1/BTB/POZ_sf | SMART:SM00512 | SUPFAM:SSF54695 | UniParc:UPI0008434243 | EnsemblPlantsGene:Zm00001d044753 | EnsemblPlants:Zm00001d044753_P001 |
| EnsemblPlants:Zm00001d044753_T001 | SEG:seg | : | : | : | : |
Description
Elongin
Coordinates
chr9:+:1257308..1268407
Molecular Weight (calculated)
16262.3 Da
IEP (calculated)
5.008
GRAVY (calculated)
-0.449
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPREHHQPQ EEEEEDTAGV VKLISAEGFE FVVDKKAAMV SNTLRNMLTS PGRYPSILHL FRSLVRRPRI TSQPPPSSSS PGGFSETRQG EVRFPEIPTN
101: ILEKICQYFY WSLHYSSGKE TAEFLIEPEI TLELMMAANY LDT
101: ILEKICQYFY WSLHYSSGKE TAEFLIEPEI TLELMMAANY LDT
1: MRETVKLISM EGFEFVIDRE AAMVSQTIRS MLTSPGGFSE SKDGVVTFPD ISTTILEKIC QYFYWSLQYS RGKETEFHIE PELTLELMMA ANYLHT
Arabidopsis Description
BTB/POZ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FIG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.