Factsheet for Zm00001d010136_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038291_P001	Maize	plastid	75.32	75.32
Os05t0443500-01	Rice	plastid	69.48	72.3
EES19611	Sorghum	plastid	75.97	72.22
TraesCS1A01G276300.1	Wheat	plastid	68.83	70.2
TraesCS1B01G285500.1	Wheat	plastid	67.53	68.87
Solyc05g055280.1.1	Tomato	cytosol	41.56	65.31
Zm00001d012293_P001	Maize	plastid	55.84	58.11
Bra009066.1-P	Field mustard	cytosol	35.71	56.12
Solyc11g006910.1.1	Tomato	mitochondrion, plastid	44.16	54.4
Zm00001d034760_P001	Maize	mitochondrion, plastid	53.25	53.95
PGSC0003DMT400060121	Potato	plastid	48.7	50.0
PGSC0003DMT400061612	Potato	plastid	47.4	48.67
Zm00001d035001_P001	Maize	plastid	43.51	44.67
Zm00001d003797_P001	Maize	plastid	44.81	44.52
Zm00001d035002_P001	Maize	plastid	39.61	44.2
Zm00001d035003_P001	Maize	plastid	39.61	43.57
Solyc04g009710.1.1	Tomato	plastid	43.51	43.51
Zm00001d025352_P001	Maize	plastid	42.86	42.86
TraesCS1D01G275800.2	Wheat	plastid	67.53	39.54
Zm00001d049732_P001	Maize	plastid	39.61	39.35
CDY21622	Canola	plastid	37.66	38.93
CDX69869	Canola	plastid	35.71	37.16
AT5G10000.1	Thale cress	plastid	35.71	37.16
Zm00001d033469_P001	Maize	plastid	25.97	26.67
Zm00001d013534_P002	Maize	plastid	24.68	19.79

Protein Annotations

MapMan:1.1.5.1	InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	InterPro:2Fe2S_fd_BS	Gene3D:3.10.20.30	UniProt:A0A1D6FPD0
ProteinID:AQK93485.1	InterPro:Beta-grasp_dom_sf	InterPro:Fd_pln	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0022900
GO:GO:0046872	GO:GO:0051536	GO:GO:0051537	GO:GO:0055114	InterPro:IPR001041	InterPro:IPR012675
PFAM:PF00111	ScanProsite:PS00197	PFscan:PS51085	PANTHER:PTHR43112	PANTHER:PTHR43112:SF11	SUPFAM:SSF54292
TIGRFAMs:TIGR02008	UniParc:UPI000221B450	EnsemblPlantsGene:Zm00001d010136	EnsemblPlants:Zm00001d010136_P001	EnsemblPlants:Zm00001d010136_T001	:

Description

Probable ferredoxin-4 chloroplastic

Coordinates

chr8:+:100970945..100971409

Molecular Weight (calculated)

16387.2 Da

IEP (calculated)

6.344

GRAVY (calculated)

-0.276

Length

154 amino acids

Sequence
(BLAST)

001: MSTATAPRLS VPKSSGASYR TAAPAPKTAL SFVAGHKRQQ ALPRARLSSR RFVVAPAAVH RVRLVGPDGA EHEFEAPEDT YILEAAESAG VELPFSCRAG
101: SCSTCAGKMS AGEVDQSEGS FLDDGQTAEG YLLTCISYPR ADCVIHTHKE EELY

Best Arabidopsis Sequence Match ( AT2G27510.1 )
(BLAST)

001: MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF

Arabidopsis Description

FD3Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.