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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
  • endoplasmic reticulum 1
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra040406.1-P Field mustard plastid 100.0 100.0
CDY41900 Canola plastid 93.12 93.45
CDY30018 Canola plastid 90.58 90.58
CDY21110 Canola plastid 88.77 89.09
AT3G04790.1 Thale cress plastid 82.61 82.61
GSMUA_Achr9P10620_001 Banana cytosol, extracellular 59.06 76.53
KRH68720 Soybean nucleus, plastid 67.39 66.19
Os07t0176900-01 Rice plastid 66.67 65.71
VIT_14s0030g01900.t01 Wine grape plastid 67.03 65.37
TraesCS6D01G061600.2 Wheat plastid 64.86 64.86
KRG96958 Soybean plastid 65.94 64.77
TraesCS6B01G084400.1 Wheat golgi 64.13 64.6
TraesCS2A01G234900.1 Wheat mitochondrion, plastid 63.41 64.34
TraesCS2D01G238600.2 Wheat mitochondrion, plastid 63.77 63.08
PGSC0003DMT400050076 Potato cytosol, plastid 66.3 62.67
Solyc01g097460.2.1 Tomato plastid 66.3 62.46
KXG34505 Sorghum plastid 64.86 58.69
CDY09514 Canola cytosol 52.9 56.37
CDY03702 Canola cytosol 52.17 55.6
KRH44502 Soybean plastid 36.23 54.35
TraesCS6A01G063200.1 Wheat plastid 58.33 53.67
CDX77814 Canola cytosol 51.45 53.38
CDY40387 Canola cytosol 51.45 53.18
CDY37370 Canola cytosol 50.72 52.43
CDY17683 Canola cytosol 50.36 48.43
Zm00001d018936_P001 Maize cytosol, extracellular 61.96 42.22
GSMUA_Achr8P03140_001 Banana plasma membrane 63.04 33.08
Solyc04g047740.1.1 Tomato cytosol 17.39 32.21
CDY49016 Canola plastid 23.91 23.32
CDY49497 Canola plastid 22.83 21.5
CDY66019 Canola cytosol 5.8 14.55
CDY29709 Canola cytosol 5.8 14.55
CDY10254 Canola cytosol 5.8 14.55
CDY06683 Canola cytosol 5.8 14.55
CDX96931 Canola cytosol 5.8 14.55
CDY21109 Canola cytosol 13.04 13.79
Protein Annotations
KEGG:00030+5.3.1.6KEGG:00051+5.3.1.6KEGG:00710+5.3.1.6MapMan:1.2.9Gene3D:3.30.70.260Gene3D:3.40.50.1360
MapMan:3.9.2.1GO:A0A078ILE3UniProt:A0A078ILE3EnsemblPlants:CDY50757ProteinID:CDY50757ProteinID:CDY50757.1
GO:GO:0003674GO:GO:0003824GO:GO:0004751GO:GO:0006139GO:GO:0008150GO:GO:0008152
GO:GO:0009052GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00097444001HAMAP:MF_00170InterPro:NagB/RpiA_transferase-likePFAM:PF06026
PANTHER:PTHR43748PANTHER:PTHR43748:SF3MetaCyc:PWY-1861MetaCyc:PWY-5723InterPro:Ribose5P_isomerase_typAInterPro:Ribose5P_isomerase_typA_subgr
SUPFAM:SSF100950SUPFAM:SSF75445TIGRFAMs:TIGR00021UniPathway:UPA00115UniParc:UPI000253ECA0SEG:seg
Description
BnaAnng10640DBnaAnng10640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILE3]
Coordinates
chrLK032937:+:54398..55541
Molecular Weight (calculated)
29398.6 Da
IEP (calculated)
6.531
GRAVY (calculated)
0.059
Length
276 amino acids
Sequence
(BLAST)
001: MASLSFVSSS HLTLRAPSPN NLRSSSPRPT SVSFSVKAQS VALSQDDLKK LAAEKAVESI KPGMVLGLGT GSTAAFAVDQ IGKLLSSGQL HDIVGIPTSK
101: RTEDQARSLG IPLVALDTHP RIDLAIDGAD EVDPNLDLVK GRGGALLREK MVEAVAERFI VVADDTKLVK GLGGSGLAMP VEVVQFCWKF NLVRLRDLFK
201: EFGCEAKLRV GEGGEAYVTD NSNFIIDLYF KEPLKDGFAA GREIGKFEGV VEHGLFLGMA TSVIIAGKNG VEVMNK
Best Arabidopsis Sequence Match ( AT3G04790.1 )
(BLAST)
001: MASLSFVSSS HLTLRTPSIA LRSTGSSPRT SVSFSVKAQS VALSQDDLKK LAAEKAVEAI KPGMVLGLGT GSTAAFAVDQ IGKLLSSGEL YDIVGIPTSK
101: RTEEQARSLG IPLVGLDTHP RIDLAIDGAD EVDPNLDLVK GRGGALLREK MVEAVADKFI VVADDTKLVT GLGGSGLAMP VEVVQFCWNF NLIRLQDLFK
201: EFGCESKLRV DGDGKPYVTD NSNYIIDLYF KTPLKDGFAA AKEIGKFQGV VEHGLFLGMA TSVIIAGKNG VEVMTK
Arabidopsis Description
RPI3EMB3119 [Source:UniProtKB/TrEMBL;Acc:A0A178V804]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.