Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03702 | Canola | cytosol | 98.07 | 98.07 |
| AT1G71100.1 | Thale cress | cytosol | 83.78 | 81.27 |
| CDY37370 | Canola | cytosol | 71.04 | 68.91 |
| CDY40387 | Canola | cytosol | 70.66 | 68.54 |
| KRG90972 | Soybean | cytosol | 69.5 | 67.92 |
| KRH35797 | Soybean | cytosol, mitochondrion | 69.11 | 67.29 |
| VIT_01s0011g04630.t01 | Wine grape | cytosol | 69.88 | 67.29 |
| PGSC0003DMT400015282 | Potato | cytosol | 67.95 | 66.17 |
| PGSC0003DMT400078358 | Potato | cytosol, plastid | 67.57 | 65.3 |
| Solyc05g008370.1.1 | Tomato | cytosol | 66.8 | 64.55 |
| CDX77814 | Canola | cytosol | 66.02 | 64.29 |
| GSMUA_Achr3P29130_001 | Banana | cytosol, mitochondrion | 50.97 | 62.56 |
| CDY17683 | Canola | cytosol | 67.57 | 60.98 |
| GSMUA_Achr4P11200_001 | Banana | cytosol | 57.92 | 58.59 |
| VIT_06s0004g03340.t01 | Wine grape | plastid | 68.34 | 58.22 |
| GSMUA_Achr4P06520_001 | Banana | cytosol | 56.76 | 56.76 |
| GSMUA_Achr4P03710_001 | Banana | plastid | 56.37 | 55.94 |
| CDY21110 | Canola | plastid | 56.76 | 53.45 |
| CDY41900 | Canola | plastid | 56.76 | 53.45 |
| CDY30018 | Canola | plastid | 56.76 | 53.26 |
| CDY50757 | Canola | plastid | 56.37 | 52.9 |
| EES09254 | Sorghum | cytosol | 52.9 | 52.69 |
| TraesCS2D01G271700.1 | Wheat | cytosol | 51.74 | 52.34 |
| OQU79375 | Sorghum | cytosol | 26.64 | 50.0 |
| Os04t0306400-01 | Rice | cytosol | 51.35 | 48.36 |
| HORVU2Hr1G066480.1 | Barley | plastid | 35.14 | 44.61 |
| Zm00001d052482_P001 | Maize | cytosol | 15.06 | 36.79 |
| CDY49016 | Canola | plastid | 27.03 | 24.73 |
| Zm00001d030701_P001 | Maize | extracellular | 52.12 | 23.28 |
| CDY49497 | Canola | plastid | 25.48 | 22.53 |
| CDY66019 | Canola | cytosol | 8.88 | 20.91 |
| CDY29709 | Canola | cytosol | 8.88 | 20.91 |
| CDY10254 | Canola | cytosol | 8.88 | 20.91 |
| CDY06683 | Canola | cytosol | 8.88 | 20.91 |
| CDX96931 | Canola | cytosol | 8.88 | 20.91 |
| CDY21109 | Canola | cytosol | 14.29 | 14.18 |
Protein Annotations
| KEGG:00030+5.3.1.6 | KEGG:00051+5.3.1.6 | KEGG:00710+5.3.1.6 | Gene3D:3.30.70.260 | Gene3D:3.40.50.1360 | MapMan:3.9.2.1 |
| GO:A0A078F966 | UniProt:A0A078F966 | EnsemblPlants:CDY09514 | ProteinID:CDY09514 | ProteinID:CDY09514.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004751 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009052 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00031088001 | HAMAP:MF_00170 | InterPro:NagB/RpiA_transferase-like | PFAM:PF06026 | PANTHER:PTHR43748 |
| PANTHER:PTHR43748:SF2 | MetaCyc:PWY-1861 | MetaCyc:PWY-5723 | InterPro:Ribose5P_isomerase_typA | InterPro:Ribose5P_isomerase_typA_subgr | SUPFAM:SSF100950 |
| SUPFAM:SSF75445 | TIGRFAMs:TIGR00021 | UniPathway:UPA00115 | UniParc:UPI0004EE8673 | : | : |
Description
BnaC02g20560DBnaC02g20560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F966]
Coordinates
chrLK031996:+:922270..923180
Molecular Weight (calculated)
27225.9 Da
IEP (calculated)
5.697
GRAVY (calculated)
0.079
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSASNPLVT SSVVDDSPLP SNLNQDDLKK LAAYKAVEYV KSGMVVGLGT GSTAKHAVAR ISELLRQGKL RDIIGIPTST TTHEQAVSLG IPLSDLDSHP
101: VVDLSIDGAD EVDPALNLVK GRGGSLLREK MVEGASKKFV VIVDESKLVK HLGGSGLAVP VEVVPFCCDF TRGKLEELFR EAGCKAKLRV KSGGETAAVT
201: DNGNFVVDLY LERDMGDLEA ASEAILRLPG VVEHGMFLGI ATTLIVAGKS GVTVKDRFG
101: VVDLSIDGAD EVDPALNLVK GRGGSLLREK MVEGASKKFV VIVDESKLVK HLGGSGLAVP VEVVPFCCDF TRGKLEELFR EAGCKAKLRV KSGGETAAVT
201: DNGNFVVDLY LERDMGDLEA ASEAILRLPG VVEHGMFLGI ATTLIVAGKS GVTVKDRFG
001: MGSAFDPLVT ATEDLAAVNS APPLSNLTQE ELKKIAAYKA VEFVESGMVI GLGTGSTAKH AVARISELLR EGKLKDIIGI PTSTTTHEQA VSLGIPLSDL
101: DSHPVVDLSI DGADEVDPAL NLVKGRGGSL LREKMIEGAS KKFVVIVDES KLVKYIGGSG LAVPVEVVPF CCDFTRGKLE ELFRDSGCVA KLRMKIGSNG
201: EEAAPAVTDN RNYVVDLYLE RDIGDLEVAS EAILRFPGVV EHGMFLGMAT TLIVAGKFGV TVKDRFG
101: DSHPVVDLSI DGADEVDPAL NLVKGRGGSL LREKMIEGAS KKFVVIVDES KLVKYIGGSG LAVPVEVVPF CCDFTRGKLE ELFRDSGCVA KLRMKIGSNG
201: EEAAPAVTDN RNYVVDLYLE RDIGDLEVAS EAILRFPGVV EHGMFLGMAT TLIVAGKFGV TVKDRFG
Arabidopsis Description
RPI1Probable ribose-5-phosphate isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C998]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.