Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03702 | Canola | cytosol | 82.02 | 84.56 |
| Bra007961.1-P | Field mustard | cytosol | 81.27 | 83.78 |
| CDY09514 | Canola | cytosol | 81.27 | 83.78 |
| VIT_01s0011g04630.t01 | Wine grape | cytosol | 69.29 | 68.77 |
| KRG90972 | Soybean | cytosol | 67.79 | 68.3 |
| KRH35797 | Soybean | cytosol, mitochondrion | 67.42 | 67.67 |
| Solyc05g008370.1.1 | Tomato | cytosol | 65.54 | 65.3 |
| PGSC0003DMT400078358 | Potato | cytosol, plastid | 65.54 | 65.3 |
| AT2G01290.1 | Thale cress | cytosol | 64.79 | 65.28 |
| PGSC0003DMT400015282 | Potato | cytosol | 64.79 | 65.04 |
| GSMUA_Achr3P29130_001 | Banana | cytosol, mitochondrion | 49.06 | 62.09 |
| VIT_06s0004g03340.t01 | Wine grape | plastid | 68.16 | 59.87 |
| GSMUA_Achr4P11200_001 | Banana | cytosol | 55.43 | 57.81 |
| GSMUA_Achr4P06520_001 | Banana | cytosol | 55.06 | 56.76 |
| GSMUA_Achr4P03710_001 | Banana | plastid | 54.68 | 55.94 |
| EES09254 | Sorghum | cytosol | 53.18 | 54.62 |
| TraesCS2D01G271700.1 | Wheat | cytosol | 50.56 | 52.73 |
| Os04t0306400-01 | Rice | cytosol | 52.06 | 50.55 |
| AT3G04790.1 | Thale cress | plastid | 52.06 | 50.36 |
| OQU79375 | Sorghum | cytosol | 25.84 | 50.0 |
| HORVU2Hr1G066480.1 | Barley | plastid | 34.83 | 45.59 |
| Zm00001d052482_P001 | Maize | cytosol | 16.1 | 40.57 |
| Zm00001d030701_P001 | Maize | extracellular | 52.81 | 24.31 |
| AT5G44520.2 | Thale cress | cytosol, plastid | 22.47 | 18.4 |
Protein Annotations
| KEGG:00030+5.3.1.6 | KEGG:00051+5.3.1.6 | KEGG:00710+5.3.1.6 | Gene3D:3.30.70.260 | Gene3D:3.40.50.1360 | MapMan:3.9.2.1 |
| EntrezGene:843450 | UniProt:A0A178W9W1 | ProteinID:AAG51684.1 | ProteinID:AEE35161.1 | EMBL:AF360330 | ArrayExpress:AT1G71100 |
| EnsemblPlantsGene:AT1G71100 | RefSeq:AT1G71100 | TAIR:AT1G71100 | RefSeq:AT1G71100-TAIR-G | EnsemblPlants:AT1G71100.1 | TAIR:AT1G71100.1 |
| EMBL:AY087060 | EMBL:AY142637 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004751 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005975 | GO:GO:0006098 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009052 | GO:GO:0009058 | GO:GO:0009628 |
| GO:GO:0009987 | GO:GO:0016853 | GO:GO:0030244 | GO:GO:0046109 | GO:GO:0080167 | HAMAP:MF_00170 |
| RefSeq:NP_177266.1 | InterPro:NagB/RpiA_transferase-like | ProteinID:OAP14163.1 | PFAM:PF06026 | PO:PO:0000014 | PO:PO:0000037 |
| PO:PO:0000054 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0003011 | PO:PO:0004507 | PO:PO:0004723 | PO:PO:0005708 | PO:PO:0006036 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009066 | PO:PO:0009073 | PO:PO:0020030 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025181 | PANTHER:PTHR43748 | PANTHER:PTHR43748:SF2 | UniProt:Q9C998 |
| Symbol:RSW10 | InterPro:Ribose5P_isomerase_typA | InterPro:Ribose5P_isomerase_typA_subgr | SUPFAM:SSF100950 | SUPFAM:SSF75445 | TIGRFAMs:TIGR00021 |
| UniParc:UPI00000AC4E6 | : | : | : | : | : |
Description
RPI1Probable ribose-5-phosphate isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C998]
Coordinates
chr1:+:26814260..26815922
Molecular Weight (calculated)
28333.3 Da
IEP (calculated)
4.745
GRAVY (calculated)
0.144
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSAFDPLVT ATEDLAAVNS APPLSNLTQE ELKKIAAYKA VEFVESGMVI GLGTGSTAKH AVARISELLR EGKLKDIIGI PTSTTTHEQA VSLGIPLSDL
101: DSHPVVDLSI DGADEVDPAL NLVKGRGGSL LREKMIEGAS KKFVVIVDES KLVKYIGGSG LAVPVEVVPF CCDFTRGKLE ELFRDSGCVA KLRMKIGSNG
201: EEAAPAVTDN RNYVVDLYLE RDIGDLEVAS EAILRFPGVV EHGMFLGMAT TLIVAGKFGV TVKDRFG
101: DSHPVVDLSI DGADEVDPAL NLVKGRGGSL LREKMIEGAS KKFVVIVDES KLVKYIGGSG LAVPVEVVPF CCDFTRGKLE ELFRDSGCVA KLRMKIGSNG
201: EEAAPAVTDN RNYVVDLYLE RDIGDLEVAS EAILRFPGVV EHGMFLGMAT TLIVAGKFGV TVKDRFG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.