Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37370 | Canola | cytosol | 87.92 | 87.27 |
| CDX77814 | Canola | cytosol | 87.55 | 87.22 |
| Bra014328.1-P | Field mustard | cytosol | 87.55 | 86.89 |
| CDY40387 | Canola | cytosol | 87.55 | 86.89 |
| CDY17683 | Canola | cytosol | 84.53 | 78.05 |
| Bra024892.1-P | Field mustard | cytosol | 73.21 | 72.39 |
| VIT_01s0011g04630.t01 | Wine grape | cytosol | 70.94 | 69.89 |
| KRH35797 | Soybean | cytosol, mitochondrion | 69.43 | 69.17 |
| KRG90972 | Soybean | cytosol | 67.92 | 67.92 |
| PGSC0003DMT400015282 | Potato | cytosol | 67.55 | 67.29 |
| Solyc05g008370.1.1 | Tomato | cytosol | 66.04 | 65.3 |
| AT1G71100.1 | Thale cress | cytosol | 65.28 | 64.79 |
| PGSC0003DMT400078358 | Potato | cytosol, plastid | 65.28 | 64.55 |
| VIT_06s0004g03340.t01 | Wine grape | plastid | 70.57 | 61.51 |
| GSMUA_Achr3P29130_001 | Banana | cytosol, mitochondrion | 48.68 | 61.14 |
| GSMUA_Achr4P11200_001 | Banana | cytosol | 58.49 | 60.55 |
| GSMUA_Achr4P03710_001 | Banana | plastid | 56.98 | 57.85 |
| GSMUA_Achr4P06520_001 | Banana | cytosol | 56.23 | 57.53 |
| EES09254 | Sorghum | cytosol | 54.34 | 55.38 |
| TraesCS2D01G271700.1 | Wheat | cytosol | 50.19 | 51.95 |
| Os04t0306400-01 | Rice | cytosol | 52.83 | 50.91 |
| AT3G04790.1 | Thale cress | plastid | 52.45 | 50.36 |
| OQU79375 | Sorghum | cytosol | 23.77 | 45.65 |
| Zm00001d052482_P001 | Maize | cytosol | 17.36 | 43.4 |
| HORVU2Hr1G066480.1 | Barley | plastid | 33.21 | 43.14 |
| Zm00001d030701_P001 | Maize | extracellular | 53.96 | 24.66 |
| AT5G44520.2 | Thale cress | cytosol, plastid | 22.64 | 18.4 |
Protein Annotations
| KEGG:00030+5.3.1.6 | KEGG:00051+5.3.1.6 | KEGG:00710+5.3.1.6 | Gene3D:3.30.70.260 | Gene3D:3.40.50.1360 | MapMan:3.9.2.1 |
| EntrezGene:814657 | ProteinID:AAD14529.1 | ProteinID:ABE65420.1 | ProteinID:AEC05429.1 | ArrayExpress:AT2G01290 | EnsemblPlantsGene:AT2G01290 |
| RefSeq:AT2G01290 | TAIR:AT2G01290 | RefSeq:AT2G01290-TAIR-G | EnsemblPlants:AT2G01290.1 | TAIR:AT2G01290.1 | EMBL:AY054172 |
| EMBL:AY066038 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004751 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006098 | GO:GO:0006139 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008219 | GO:GO:0009052 | GO:GO:0009791 | GO:GO:0009987 |
| GO:GO:0010228 | GO:GO:0016853 | HAMAP:MF_00170 | RefSeq:NP_178238.1 | InterPro:NagB/RpiA_transferase-like | PFAM:PF06026 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR43748 |
| PANTHER:PTHR43748:SF2 | UniProt:Q9ZU38 | Symbol:RPI2 | InterPro:Ribose5P_isomerase_typA | InterPro:Ribose5P_isomerase_typA_subgr | SUPFAM:SSF100950 |
| SUPFAM:SSF75445 | TIGRFAMs:TIGR00021 | UniParc:UPI0000000D6E | : | : | : |
Description
RPI2Probable ribose-5-phosphate isomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU38]
Coordinates
chr2:-:148919..150585
Molecular Weight (calculated)
28517.7 Da
IEP (calculated)
5.194
GRAVY (calculated)
0.048
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MALAYDPLFI TSDKSLSAFD VASSPPQPMN LTQDELKRIA AYKAVEFVES GMVLGLGTGS TAKHAVDRIG ELLRQGKLEN IVGIPTSKKT QEQALSLGIP
101: LSDLDAHPVI DLSIDGADEV DPFLNLVKGR GGSLLREKMI EGASKKFVVI VDDSKMVKHI GGSKLALPVE IVPFCWKFTA EKLRSLLEGY GCEANLRLGE
201: KGKAFVTDNG NYIVDMHVEE DMGDLGAVSD AILRLPGVVE HGMFLDMAST VIIAGELGVK IKNKH
101: LSDLDAHPVI DLSIDGADEV DPFLNLVKGR GGSLLREKMI EGASKKFVVI VDDSKMVKHI GGSKLALPVE IVPFCWKFTA EKLRSLLEGY GCEANLRLGE
201: KGKAFVTDNG NYIVDMHVEE DMGDLGAVSD AILRLPGVVE HGMFLDMAST VIIAGELGVK IKNKH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.