Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 2
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49016 | Canola | plastid | 65.64 | 75.62 |
| Bra033747.1-P | Field mustard | plastid | 64.11 | 73.85 |
| CDY49497 | Canola | plastid | 64.42 | 71.67 |
| VIT_10s0092g00090.t01 | Wine grape | cytosol | 44.17 | 62.88 |
| GSMUA_Achr9P10110_001 | Banana | mitochondrion | 40.8 | 57.33 |
| KRH36898 | Soybean | cytosol | 17.18 | 55.45 |
| KRH11874 | Soybean | plastid | 47.55 | 53.26 |
| Solyc02g069620.2.1 | Tomato | plastid | 44.48 | 48.99 |
| Os03t0781400-01 | Rice | plastid | 42.33 | 46.15 |
| TraesCS5A01G417000.1 | Wheat | plastid | 40.8 | 44.78 |
| TraesCS5B01G419300.1 | Wheat | plastid | 40.49 | 44.44 |
| TraesCS5D01G424700.1 | Wheat | plastid | 40.18 | 43.81 |
| KXG37436 | Sorghum | plastid | 38.65 | 43.0 |
| PGSC0003DMT400054453 | Potato | plastid | 41.41 | 41.67 |
| Zm00001d013135_P002 | Maize | plastid | 38.34 | 38.94 |
| AT3G04790.1 | Thale cress | plastid | 22.7 | 26.81 |
| AT2G01290.1 | Thale cress | cytosol | 18.4 | 22.64 |
| AT1G71100.1 | Thale cress | cytosol | 18.4 | 22.47 |
Protein Annotations
| KEGG:00030+5.3.1.6 | KEGG:00051+5.3.1.6 | KEGG:00710+5.3.1.6 | Gene3D:3.30.70.260 | Gene3D:3.40.50.1360 | MapMan:35.1 |
| EntrezGene:834479 | UniProt:A0A1P8BDP5 | ProteinID:AED95119.1 | EMBL:AK221659 | ProteinID:ANM69733.1 | ArrayExpress:AT5G44520 |
| EnsemblPlantsGene:AT5G44520 | RefSeq:AT5G44520 | TAIR:AT5G44520 | RefSeq:AT5G44520-TAIR-G | EnsemblPlants:AT5G44520.2 | EMBL:AY065286 |
| EMBL:AY087134 | EMBL:AY133736 | Unigene:At.28529 | ProteinID:BAB09159.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004751 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006098 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009052 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016853 | RefSeq:NP_001331391.1 | RefSeq:NP_199265.1 | InterPro:NagB/RpiA_transferase-like |
| PFAM:PF06026 | PANTHER:PTHR43748 | PANTHER:PTHR43748:SF1 | InterPro:Ribose5P_isomerase_typA | SUPFAM:SSF100950 | SUPFAM:SSF75445 |
| UniParc:UPI0008491D57 | : | : | : | : | : |
Description
NagB/RpiA/CoA transferase-like superfamily protein [Source:TAIR;Acc:AT5G44520]
Coordinates
chr5:-:17934287..17936554
Molecular Weight (calculated)
35684.4 Da
IEP (calculated)
6.247
GRAVY (calculated)
-0.147
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MHHKTDREIR AVKTTESRLS DSNRSSHTKK MVTATASTPF SLSSSVVFTR RRNFKRFPVC ASLSPEVSPL LRAAHHTVDN YVKSGMIIGL GSGEASDFAI
101: RYLGQQLGSG SLHNVVGVPM SARSASEAAK YGIPLEYYRD GVQIDFAFHD ADAVEENTLI AVIGRRRSSQ EDDYILKQKS IVKVADEAVF MIKEEQYKAG
201: LEGSIPVLVQ SLNWLAIAEE IDDLYLGDAE VWRRASVENE GPLGGDFPIV TSDGHNILDV IFTTPIRSLA DLATSLDKID GVVDHGLIIK TRCTVVIAEE
301: TVVRSVTLQT SALEGGVRTY GQTLQK
101: RYLGQQLGSG SLHNVVGVPM SARSASEAAK YGIPLEYYRD GVQIDFAFHD ADAVEENTLI AVIGRRRSSQ EDDYILKQKS IVKVADEAVF MIKEEQYKAG
201: LEGSIPVLVQ SLNWLAIAEE IDDLYLGDAE VWRRASVENE GPLGGDFPIV TSDGHNILDV IFTTPIRSLA DLATSLDKID GVVDHGLIIK TRCTVVIAEE
301: TVVRSVTLQT SALEGGVRTY GQTLQK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.