Factsheet for Os03t0781400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G419300.1	Wheat	plastid	73.24	73.74
KXG37436	Sorghum	plastid	71.91	73.38
TraesCS5A01G417000.1	Wheat	plastid	72.58	73.06
TraesCS5D01G424700.1	Wheat	plastid	72.58	72.58
Zm00001d013135_P002	Maize	plastid	71.24	66.36
GSMUA_Achr9P10110_001	Banana	mitochondrion	48.16	62.07
VIT_10s0092g00090.t01	Wine grape	cytosol	45.15	58.95
KRH11874	Soybean	plastid	50.84	52.23
KRH36898	Soybean	cytosol	17.39	51.49
Bra033747.1-P	Field mustard	plastid	45.48	48.06
CDY49497	Canola	plastid	46.82	47.78
CDY49016	Canola	plastid	44.82	47.35
Solyc02g069620.2.1	Tomato	plastid	45.48	45.95
AT5G44520.2	Thale cress	cytosol, plastid	46.15	42.33
PGSC0003DMT400054453	Potato	plastid	45.15	41.67
Os07t0176900-01	Rice	plastid	24.75	26.43
Os04t0306400-01	Rice	cytosol	23.08	25.09

Protein Annotations

KEGG:00030+5.3.1.6	KEGG:00051+5.3.1.6	KEGG:00710+5.3.1.6	Gene3D:3.30.70.260	Gene3D:3.40.50.1360	MapMan:35.1
EntrezGene:4334316	ProteinID:ABF99185.1	EMBL:AK071970	ProteinID:BAF13371.1	ProteinID:BAS86681.1	ProteinID:EEE60040.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004751	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009052	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016853	InterPro:NagB/RpiA_transferase-like	EnsemblPlantsGene:Os03g0781400	EnsemblPlants:Os03t0781400-01
PFAM:PF06026	PANTHER:PTHR43748	PANTHER:PTHR43748:SF1	UniProt:Q10CS9	InterPro:Ribose5P_isomerase_typA	SUPFAM:SSF100950
SUPFAM:SSF75445	UniParc:UPI0000DB4758	RefSeq:XP_015632189.1	SEG:seg	:	:

Description

Ribose 5-phosphate isomerase family protein. (Os03t0781400-01);Similar to ribose-5-phosphate isomerase. (Os03t0781400-02)

Coordinates

chr3:-:32394938..32397257

Molecular Weight (calculated)

31455.7 Da

IEP (calculated)

5.226

GRAVY (calculated)

0.111

Length

299 amino acids

Sequence
(BLAST)

001: MDAVAGASVS SSSARLRPCP RPRRIGNVAP ATVRRRSRRR AVTCAAAADA DVVGLFDAAK LTVDRFVESG MVVGLGSGPA SGLAIQYLGT RLRRGSLTGI
101: LGIPSSTISA SEAVKAGIQV SSYEEGTQID FAFTDADIIE EDTMTAVIGR RKTESGEPSF MVEKGIVKSA DKLAFIIGHE KYVKGIEGSI PVLVKSANWI
201: DTAEEIDDLF LGDAEVWRRP SIGTAGPLGG DFPLVTKEGH HVLDVIFTTP IPDLGKVAES LEKIAGVVDH GIVSSIPSYV VVALNGEVQV LDEKSSVIP

Best Arabidopsis Sequence Match ( AT5G44520.2 )
(BLAST)

001: MHHKTDREIR AVKTTESRLS DSNRSSHTKK MVTATASTPF SLSSSVVFTR RRNFKRFPVC ASLSPEVSPL LRAAHHTVDN YVKSGMIIGL GSGEASDFAI
101: RYLGQQLGSG SLHNVVGVPM SARSASEAAK YGIPLEYYRD GVQIDFAFHD ADAVEENTLI AVIGRRRSSQ EDDYILKQKS IVKVADEAVF MIKEEQYKAG
201: LEGSIPVLVQ SLNWLAIAEE IDDLYLGDAE VWRRASVENE GPLGGDFPIV TSDGHNILDV IFTTPIRSLA DLATSLDKID GVVDHGLIIK TRCTVVIAEE
301: TVVRSVTLQT SALEGGVRTY GQTLQK

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:TAIR;Acc:AT5G44520]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.