CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 3
mitochondrion 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, nucleus, plasma membrane, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11874	Soybean	plastid	86.14	29.9
VIT_10s0092g00090.t01	Wine grape	cytosol	62.38	27.51
GSMUA_Achr9P10110_001	Banana	mitochondrion	58.42	25.43
Solyc02g069620.2.1	Tomato	plastid	62.38	21.28
CDY49016	Canola	plastid	59.41	21.2
CDY49497	Canola	plastid	59.41	20.48
Bra033747.1-P	Field mustard	plastid	56.44	20.14
Os03t0781400-01	Rice	plastid	51.49	17.39
PGSC0003DMT400054453	Potato	plastid	55.45	17.28
AT5G44520.2	Thale cress	cytosol, plastid	55.45	17.18
TraesCS5B01G419300.1	Wheat	plastid	50.49	17.17
TraesCS5A01G417000.1	Wheat	plastid	50.49	17.17
KXG37436	Sorghum	plastid	49.51	17.06
TraesCS5D01G424700.1	Wheat	plastid	47.52	16.05
Zm00001d013135_P002	Maize	plastid	49.51	15.58
KRG90972	Soybean	cytosol	21.78	8.3
KRH35797	Soybean	cytosol, mitochondrion	20.79	7.89
KRH68720	Soybean	nucleus, plastid	19.8	7.12
KRG96958	Soybean	plastid	18.81	6.76
KRH30286	Soybean	cytosol, nucleus	3.96	3.64
KRG98270	Soybean	cytosol	3.96	3.64
KRH44502	Soybean	plastid	1.98	1.09

Protein Annotations

KEGG:00030+5.3.1.6	KEGG:00051+5.3.1.6	KEGG:00710+5.3.1.6	EntrezGene:100806233	MapMan:35.1	EMBL:ACUP02005400
EnsemblPlantsGene:GLYMA_09G030500	GO:GO:0003674	GO:GO:0003824	GO:GO:0004751	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009052	GO:GO:0009987	UniProt:K7LBJ2	EnsemblPlants:KRH36898	ProteinID:KRH36898
ProteinID:KRH36898.1	PFAM:PF06026	PANTHER:PTHR43748	PANTHER:PTHR43748:SF1	MetaCyc:PWY-1861	MetaCyc:PWY-5723
InterPro:Ribose5P_isomerase_typA	SUPFAM:SSF75445	UniParc:UPI000296D1D3	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:2515624..2518954

Molecular Weight (calculated)

10643.8 Da

IEP (calculated)

4.111

GRAVY (calculated)

0.278

Length

101 amino acids

Sequence
(BLAST)

001: MTIAEEIDDM FLGDAEVWRR PSIGQAGPLG GDFPVVTSEG HNIPDVIFTS PIENLAEVAK CLDKVDGVVD HGVVSKVPCT VVIASQTGLK ILDKLTADIV
101: G

Best Arabidopsis Sequence Match ( AT5G44520.1 )
(BLAST)

001: MVTATASTPF SLSSSVVFTR RRNFKRFPVC ASLSPEVSPL LRAAHHTVDN YVKSGMIIGL GSGEASDFAI RYLGQQLGSG SLHNVVGVPM SARSASEAAK
101: YGIPLEYYRD GVQIDFAFHD ADAVEENTLI AVIGRRRSSQ EDDYILKQKS IVKVADEAVF MIKEEQYKAG LEGSIPVLVQ SLNWLAIAEE IDDLYLGDAE
201: VWRRASVENE GPLGGDFPIV TSDGHNILDV IFTTPIRSLA DLATSLDKID GVVDHGLIIK TRCTVVIAEE TVVRSVTLQT SALEGGVRTY GQTLQK

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:TAIR;Acc:AT5G44520]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.