CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033747.1-P	Field mustard	plastid	96.82	96.82
CDY49497	Canola	plastid	93.64	90.44
AT5G44520.2	Thale cress	cytosol, plastid	75.62	65.64
VIT_10s0092g00090.t01	Wine grape	cytosol	51.59	63.76
KRH36898	Soybean	cytosol	21.2	59.41
GSMUA_Achr9P10110_001	Banana	mitochondrion	47.7	58.19
KRH11874	Soybean	plastid	56.18	54.64
Solyc02g069620.2.1	Tomato	plastid	51.24	48.99
TraesCS5B01G419300.1	Wheat	plastid	47.35	45.12
Os03t0781400-01	Rice	plastid	47.35	44.82
TraesCS5D01G424700.1	Wheat	plastid	46.64	44.15
TraesCS5A01G417000.1	Wheat	plastid	45.58	43.43
KXG37436	Sorghum	plastid	44.88	43.34
PGSC0003DMT400054453	Potato	plastid	49.47	43.21
Zm00001d013135_P002	Maize	plastid	44.52	39.25
CDY09514	Canola	cytosol	24.73	27.03
CDY03702	Canola	cytosol	24.38	26.64
CDY40387	Canola	cytosol	23.67	25.09
CDY37370	Canola	cytosol	23.67	25.09
CDY41900	Canola	plastid	23.32	24.0
CDY21110	Canola	plastid	23.32	24.0
CDY50757	Canola	plastid	23.32	23.91
CDX77814	Canola	cytosol	22.26	23.68
CDY30018	Canola	plastid	22.97	23.55
CDY17683	Canola	cytosol	22.61	22.3
CDY66019	Canola	cytosol	5.3	13.64
CDY29709	Canola	cytosol	5.3	13.64
CDY10254	Canola	cytosol	5.3	13.64
CDY06683	Canola	cytosol	5.3	13.64
CDX96931	Canola	cytosol	5.3	13.64
CDY21109	Canola	cytosol	8.83	9.58

Protein Annotations

KEGG:00030+5.3.1.6	KEGG:00051+5.3.1.6	KEGG:00710+5.3.1.6	Gene3D:3.30.70.260	Gene3D:3.40.50.1360	MapMan:35.1
GO:A0A078IGB3	UniProt:A0A078IGB3	EnsemblPlants:CDY49016	ProteinID:CDY49016	ProteinID:CDY49016.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004751	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009052
GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00092225001	InterPro:NagB/RpiA_transferase-like	PFAM:PF06026	PANTHER:PTHR43748	PANTHER:PTHR43748:SF1
MetaCyc:PWY-1861	MetaCyc:PWY-5723	InterPro:Ribose5P_isomerase_typA	SUPFAM:SSF100950	SUPFAM:SSF75445	UniPathway:UPA00115
UniParc:UPI0001CABD44	SEG:seg	:	:	:	:

Description

BnaAnng10100DBnaAnng10100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGB3]

Coordinates

chrLK032806:-:74952..76809

Molecular Weight (calculated)

30446.1 Da

IEP (calculated)

4.907

GRAVY (calculated)

0.051

Length

283 amino acids

Sequence
(BLAST)

001: MLVAAASTLF SLSSAVFTRR RSFRVSATLS REPSPLLRAA HHTVDSYVKS GMVVGLGSGE ASDLAIRYLG HQLRSGSVQD VVGVPMSARS ASEAAKYGVP
101: LKHFRDDFQI DFAFHDADAV EEGTLVSVVG RRRTTQEDDY ILRQKSIVKA ADEAVFMVKE EQYKSGLEGS IPVLVQSLNW LAIAEEIDDL YLGDAEVWRR
201: ASVGDAGPLG GDFPIVTSDG HNILDVIFTT PIPSLANVAK SLDNIDGVVD HGLVIKTRCT VVIAGETEVR TVTLQTSAVE DGV

Best Arabidopsis Sequence Match ( AT5G44520.2 )
(BLAST)

001: MHHKTDREIR AVKTTESRLS DSNRSSHTKK MVTATASTPF SLSSSVVFTR RRNFKRFPVC ASLSPEVSPL LRAAHHTVDN YVKSGMIIGL GSGEASDFAI
101: RYLGQQLGSG SLHNVVGVPM SARSASEAAK YGIPLEYYRD GVQIDFAFHD ADAVEENTLI AVIGRRRSSQ EDDYILKQKS IVKVADEAVF MIKEEQYKAG
201: LEGSIPVLVQ SLNWLAIAEE IDDLYLGDAE VWRRASVENE GPLGGDFPIV TSDGHNILDV IFTTPIRSLA DLATSLDKID GVVDHGLIIK TRCTVVIAEE
301: TVVRSVTLQT SALEGGVRTY GQTLQK

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:TAIR;Acc:AT5G44520]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.