Factsheet for GSMUA_Achr9P10110_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0092g00090.t01	Wine grape	cytosol	66.38	67.25
KRH36898	Soybean	cytosol	25.43	58.42
KRH11874	Soybean	plastid	67.24	53.61
Solyc02g069620.2.1	Tomato	plastid	63.79	50.0
KXG37436	Sorghum	plastid	62.07	49.15
TraesCS5D01G424700.1	Wheat	plastid	62.07	48.16
Os03t0781400-01	Rice	plastid	62.07	48.16
Bra033747.1-P	Field mustard	plastid	58.62	48.06
TraesCS5A01G417000.1	Wheat	plastid	61.21	47.81
TraesCS5B01G419300.1	Wheat	plastid	61.21	47.81
CDY49016	Canola	plastid	58.19	47.7
CDY49497	Canola	plastid	58.19	46.08
Zm00001d013135_P002	Maize	plastid	62.5	45.17
PGSC0003DMT400054453	Potato	plastid	59.48	42.59
AT5G44520.2	Thale cress	cytosol, plastid	57.33	40.8
GSMUA_Achr3P29130_001	Banana	cytosol, mitochondrion	28.02	30.81
GSMUA_Achr9P10620_001	Banana	cytosol, extracellular	25.43	27.7
GSMUA_Achr4P11200_001	Banana	cytosol	27.59	25.0
GSMUA_Achr4P06520_001	Banana	cytosol	27.59	24.71
GSMUA_Achr4P03710_001	Banana	plastid	26.72	23.75
GSMUA_Achr8P03140_001	Banana	plasma membrane	25.86	11.41

Protein Annotations

KEGG:00030+5.3.1.6	KEGG:00051+5.3.1.6	KEGG:00710+5.3.1.6	Gene3D:3.30.70.260	Gene3D:3.40.50.1360	MapMan:35.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004751	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009052	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr9G10110_001	EnsemblPlants:GSMUA_Achr9P10110_001	EnsemblPlants:GSMUA_Achr9T10110_001	UniProt:M0TZ20
InterPro:NagB/RpiA_transferase-like	PFAM:PF06026	PANTHER:PTHR43748	PANTHER:PTHR43748:SF1	InterPro:Ribose5P_isomerase_typA	SUPFAM:SSF100950
SUPFAM:SSF75445	UniParc:UPI000296BB5E	SEG:seg	:	:	:

Description

Putative Ribose-5-phosphate isomerase A [Source:GMGC_GENE;Acc:GSMUA_Achr9G10110_001]

Coordinates

chr9:-:6516438..6519727

Molecular Weight (calculated)

24588.1 Da

IEP (calculated)

4.075

GRAVY (calculated)

0.120

Length

232 amino acids

Sequence
(BLAST)

001: MVVGLGSGRA SGLAIKYLGQ RLREGALKGI VGVPTSVSSA SEAAKAGIPL NNYQENLQID FAFDDADLIE ERTLIAIIGR RKFEGGESII EEKSIVKTAS
101: GLAFIVAENQ YTSDLDGSIP VLVNSGNWLE TAEEIDDLFL GDAEVWRRPS SGDAGPLGGD FPLVTREGHH VLDVIFTSPI LDLGQVAESL DQIDGVVDHG
201: IICGIPCTVI IASNDGVEVV DNLSKDRVID SL

Best Arabidopsis Sequence Match ( AT5G44520.2 )
(BLAST)

001: MHHKTDREIR AVKTTESRLS DSNRSSHTKK MVTATASTPF SLSSSVVFTR RRNFKRFPVC ASLSPEVSPL LRAAHHTVDN YVKSGMIIGL GSGEASDFAI
101: RYLGQQLGSG SLHNVVGVPM SARSASEAAK YGIPLEYYRD GVQIDFAFHD ADAVEENTLI AVIGRRRSSQ EDDYILKQKS IVKVADEAVF MIKEEQYKAG
201: LEGSIPVLVQ SLNWLAIAEE IDDLYLGDAE VWRRASVENE GPLGGDFPIV TSDGHNILDV IFTTPIRSLA DLATSLDKID GVVDHGLIIK TRCTVVIAEE
301: TVVRSVTLQT SALEGGVRTY GQTLQK

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:TAIR;Acc:AT5G44520]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.