Factsheet for TraesCS5D01G424700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G419300.1	Wheat	plastid	93.65	94.28
TraesCS5A01G417000.1	Wheat	plastid	86.29	86.87
Os03t0781400-01	Rice	plastid	72.58	72.58
KXG37436	Sorghum	plastid	69.9	71.33
Zm00001d013135_P002	Maize	plastid	69.23	64.49
GSMUA_Achr9P10110_001	Banana	mitochondrion	48.16	62.07
VIT_10s0092g00090.t01	Wine grape	cytosol	45.48	59.39
KRH11874	Soybean	plastid	49.16	50.52
KRH36898	Soybean	cytosol	16.05	47.52
Bra033747.1-P	Field mustard	plastid	44.15	46.64
CDY49016	Canola	plastid	44.15	46.64
CDY49497	Canola	plastid	44.82	45.73
Solyc02g069620.2.1	Tomato	plastid	45.15	45.61
PGSC0003DMT400054453	Potato	plastid	44.82	41.36
AT5G44520.2	Thale cress	cytosol, plastid	43.81	40.18
TraesCS6D01G061600.2	Wheat	plastid	26.09	28.26
TraesCS2D01G238600.2	Wheat	mitochondrion, plastid	26.09	27.96
TraesCS2D01G271700.1	Wheat	cytosol	22.74	26.56
TraesCS5D01G424600.1	Wheat	mitochondrion	7.69	20.0
TraesCS2D01G492300.1	Wheat	cytosol	5.69	15.45
TraesCS7D01G377100.1	Wheat	cytosol	5.69	15.45

Protein Annotations

KEGG:00030+5.3.1.6	KEGG:00051+5.3.1.6	KEGG:00710+5.3.1.6	Gene3D:3.30.70.260	Gene3D:3.40.50.1360	MapMan:35.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004751	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009052	GO:GO:0009987	InterPro:NagB/RpiA_transferase-like	PFAM:PF06026	PANTHER:PTHR43748	PANTHER:PTHR43748:SF1
InterPro:Ribose5P_isomerase_typA	SUPFAM:SSF100950	SUPFAM:SSF75445	EnsemblPlantsGene:TraesCS5D01G424700	EnsemblPlants:TraesCS5D01G424700.1	TIGR:cd01398
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:483718177..483720161

Molecular Weight (calculated)

31393.6 Da

IEP (calculated)

6.256

GRAVY (calculated)

0.055

Length

299 amino acids

Sequence
(BLAST)

001: MEAVARASIA ASSHARVPLC RRPRPRQRHA ARCLQGRRSV ACAAAADADV VRLFDAAKLT VDEFVKSGMV VGLGSGAASG LAVQYLGTRL RRGSLTGIVG
101: IPSSVICASE AEKAGIKVGN HEEGAQIDFA FADADVIEEG TLAAVIGRGK TESGQPSFIQ EKGIVKSADK VAFIIDNDKY VNGIEGSIPV LVKSGNWIDT
201: AEEIDDLFLG DAEVWRRPSI GTAGPSGGDF PLVTKEGHHV LDVIFTTPIQ DLGKVAEGLE KIVGVVEHGI ICNTTPYAVI ASKGEVQVLD RKSSVIPNT

Best Arabidopsis Sequence Match ( AT5G44520.2 )
(BLAST)

001: MHHKTDREIR AVKTTESRLS DSNRSSHTKK MVTATASTPF SLSSSVVFTR RRNFKRFPVC ASLSPEVSPL LRAAHHTVDN YVKSGMIIGL GSGEASDFAI
101: RYLGQQLGSG SLHNVVGVPM SARSASEAAK YGIPLEYYRD GVQIDFAFHD ADAVEENTLI AVIGRRRSSQ EDDYILKQKS IVKVADEAVF MIKEEQYKAG
201: LEGSIPVLVQ SLNWLAIAEE IDDLYLGDAE VWRRASVENE GPLGGDFPIV TSDGHNILDV IFTTPIRSLA DLATSLDKID GVVDHGLIIK TRCTVVIAEE
301: TVVRSVTLQT SALEGGVRTY GQTLQK

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:TAIR;Acc:AT5G44520]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.