Factsheet for Zm00001d013135_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37436	Sorghum	plastid	78.19	85.67
Os03t0781400-01	Rice	plastid	66.36	71.24
TraesCS5A01G417000.1	Wheat	plastid	64.49	69.7
TraesCS5B01G419300.1	Wheat	plastid	64.17	69.36
TraesCS5D01G424700.1	Wheat	plastid	64.49	69.23
GSMUA_Achr9P10110_001	Banana	mitochondrion	45.17	62.5
VIT_10s0092g00090.t01	Wine grape	cytosol	40.5	56.77
KRH11874	Soybean	plastid	45.48	50.17
KRH36898	Soybean	cytosol	15.58	49.51
Solyc02g069620.2.1	Tomato	plastid	42.06	45.61
Bra033747.1-P	Field mustard	plastid	39.88	45.23
CDY49016	Canola	plastid	39.25	44.52
CDY49497	Canola	plastid	40.19	44.03
PGSC0003DMT400054453	Potato	plastid	42.37	41.98
AT5G44520.2	Thale cress	cytosol, plastid	38.94	38.34
Zm00001d052482_P001	Maize	cytosol	9.35	28.3
Zm00001d018936_P001	Maize	cytosol, extracellular	22.43	17.78
Zm00001d030701_P001	Maize	extracellular	20.25	11.21

Protein Annotations

KEGG:00030+5.3.1.6	KEGG:00051+5.3.1.6	KEGG:00710+5.3.1.6	Gene3D:3.30.70.260	Gene3D:3.40.50.1360	MapMan:35.1
UniProt:A0A1D6GG75	ProteinID:AQK62551.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004751	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009052	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016853	InterPro:NagB/RpiA_transferase-like
PFAM:PF06026	PANTHER:PTHR43748	PANTHER:PTHR43748:SF1	InterPro:Ribose5P_isomerase_typA	SUPFAM:SSF100950	SUPFAM:SSF75445
UniParc:UPI00084486B2	EnsemblPlantsGene:Zm00001d013135	EnsemblPlants:Zm00001d013135_P002	EnsemblPlants:Zm00001d013135_T002	SEG:seg	:

Description

Ribose-5-phosphate isomerase

Coordinates

chr5:+:5325997..5328420

Molecular Weight (calculated)

33893.3 Da

IEP (calculated)

5.410

GRAVY (calculated)

-0.036

Length

321 amino acids

Sequence
(BLAST)

001: MSLVLAAPCR EAFQLNSSIP SSSMEAMPRP SVAPSLQLQA RPCPRWPRRK HCPPSSVASR RVACSASAAD ADVVDLFDAA KLTVDKFVTS GMVVGLGSGP
101: ASALAIQYLG TRLRRGSLAG ITAVTSSVLS ASEADKAGIR ANSYQEGTQI DFAFTDAEAI EEGTLAAVIG RRKTESGEPS FMAEKAMAKS AHKLAFITGN
201: DKYVTTGVEG SIPVLIKSGN WIDTAEEIDD LFLGDAEVWR RPSFGTAGPL GGDHPLVTKE GHHVLDVIFT TPIQDLGQVA EKLDKVDGVV DHGIICSNQP
301: YAVIASKGEV QVLDEKSSVI Q

Best Arabidopsis Sequence Match ( AT5G44520.2 )
(BLAST)

001: MHHKTDREIR AVKTTESRLS DSNRSSHTKK MVTATASTPF SLSSSVVFTR RRNFKRFPVC ASLSPEVSPL LRAAHHTVDN YVKSGMIIGL GSGEASDFAI
101: RYLGQQLGSG SLHNVVGVPM SARSASEAAK YGIPLEYYRD GVQIDFAFHD ADAVEENTLI AVIGRRRSSQ EDDYILKQKS IVKVADEAVF MIKEEQYKAG
201: LEGSIPVLVQ SLNWLAIAEE IDDLYLGDAE VWRRASVENE GPLGGDFPIV TSDGHNILDV IFTTPIRSLA DLATSLDKID GVVDHGLIIK TRCTVVIAEE
301: TVVRSVTLQT SALEGGVRTY GQTLQK

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:TAIR;Acc:AT5G44520]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.