CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013135_P002	Maize	plastid	85.67	78.19
Os03t0781400-01	Rice	plastid	73.38	71.91
TraesCS5B01G419300.1	Wheat	plastid	72.35	71.38
TraesCS5A01G417000.1	Wheat	plastid	71.67	70.71
TraesCS5D01G424700.1	Wheat	plastid	71.33	69.9
GSMUA_Achr9P10110_001	Banana	mitochondrion	49.15	62.07
VIT_10s0092g00090.t01	Wine grape	cytosol	45.05	57.64
KRH36898	Soybean	cytosol	17.06	49.51
KRH11874	Soybean	plastid	48.81	49.14
Solyc02g069620.2.1	Tomato	plastid	46.42	45.95
Bra033747.1-P	Field mustard	plastid	44.03	45.58
CDY49497	Canola	plastid	45.05	45.05
CDY49016	Canola	plastid	43.34	44.88
PGSC0003DMT400054453	Potato	plastid	45.73	41.36
AT5G44520.2	Thale cress	cytosol, plastid	43.0	38.65
EES09254	Sorghum	cytosol	23.21	26.15
OQU79375	Sorghum	cytosol	10.92	23.19
KXG34505	Sorghum	plastid	23.89	22.95
EES13034	Sorghum	cytosol	4.78	12.73
EER98053	Sorghum	cytosol	4.78	12.73

Protein Annotations

KEGG:00030+5.3.1.6	KEGG:00051+5.3.1.6	KEGG:00710+5.3.1.6	Gene3D:3.30.70.260	Gene3D:3.40.50.1360	MapMan:35.1
UniProt:A0A1B6QHP8	GO:GO:0003674	GO:GO:0003824	GO:GO:0004751	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009052
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	EnsemblPlants:KXG37436	ProteinID:KXG37436	ProteinID:KXG37436.1
InterPro:NagB/RpiA_transferase-like	PFAM:PF06026	PANTHER:PTHR43748	PANTHER:PTHR43748:SF1	MetaCyc:PWY-1861	MetaCyc:PWY-5723
InterPro:Ribose5P_isomerase_typA	EnsemblPlantsGene:SORBI_3001G069000	SUPFAM:SSF100950	SUPFAM:SSF75445	UniParc:UPI00081AB2AB	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:5257184..5259944

Molecular Weight (calculated)

30929.8 Da

IEP (calculated)

4.915

GRAVY (calculated)

-0.039

Length

293 amino acids

Sequence
(BLAST)

001: MEAMARPSVA PSLQPRPCPR PHRNSCPPSS MRRRVACSAS AADADVVDLF DAAKLTVDKF VSSGMVVGLG SGPASALAIQ YLGTRLRRGS LTGITAVTSS
101: VLSANEADMA GIRASSYQEG TQIDFAFTDA EVIEEGTLAA VIGRRKTESG EPSFMVEKAM AKSADKLAFI TGHDKYVTGI EGSIPVLVKS GNWIDTAEEI
201: DDLFLGDAEV WRRPSFGTAG PLGGDHPLVT KEGHHVLDVI FTTPISDLGQ VAEKLDKIDG VVDHGIICGN QSYAVIASKG EVQVLDEKSS VIQ

Best Arabidopsis Sequence Match ( AT5G44520.2 )
(BLAST)

001: MHHKTDREIR AVKTTESRLS DSNRSSHTKK MVTATASTPF SLSSSVVFTR RRNFKRFPVC ASLSPEVSPL LRAAHHTVDN YVKSGMIIGL GSGEASDFAI
101: RYLGQQLGSG SLHNVVGVPM SARSASEAAK YGIPLEYYRD GVQIDFAFHD ADAVEENTLI AVIGRRRSSQ EDDYILKQKS IVKVADEAVF MIKEEQYKAG
201: LEGSIPVLVQ SLNWLAIAEE IDDLYLGDAE VWRRASVENE GPLGGDFPIV TSDGHNILDV IFTTPIRSLA DLATSLDKID GVVDHGLIIK TRCTVVIAEE
301: TVVRSVTLQT SALEGGVRTY GQTLQK

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:TAIR;Acc:AT5G44520]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.