CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G066480.1	Barley	plastid	76.81	51.96
EES09254	Sorghum	cytosol	85.51	45.38
TraesCS2D01G271700.1	Wheat	cytosol	76.81	41.41
GSMUA_Achr3P29130_001	Banana	cytosol, mitochondrion	59.42	38.86
Os04t0306400-01	Rice	cytosol	76.09	38.18
GSMUA_Achr4P11200_001	Banana	cytosol	59.42	32.03
GSMUA_Achr4P06520_001	Banana	cytosol	58.7	31.27
GSMUA_Achr4P03710_001	Banana	plastid	58.7	31.03
KRG90972	Soybean	cytosol	52.17	27.17
KRH35797	Soybean	cytosol, mitochondrion	52.17	27.07
Bra007961.1-P	Field mustard	cytosol	50.72	27.03
CDY03702	Canola	cytosol	50.72	27.03
CDY09514	Canola	cytosol	50.0	26.64
PGSC0003DMT400015282	Potato	cytosol	50.72	26.32
AT1G71100.1	Thale cress	cytosol	50.0	25.84
PGSC0003DMT400078358	Potato	cytosol, plastid	49.28	25.37
Solyc05g008370.1.1	Tomato	cytosol	49.28	25.37
VIT_01s0011g04630.t01	Wine grape	cytosol	49.28	25.28
CDY40387	Canola	cytosol	48.55	25.09
CDY37370	Canola	cytosol	48.55	25.09
Bra014328.1-P	Field mustard	cytosol	48.55	25.09
CDX77814	Canola	cytosol	47.1	24.44
AT2G01290.1	Thale cress	cytosol	45.65	23.77
CDY17683	Canola	cytosol	48.55	23.34
VIT_06s0004g03340.t01	Wine grape	plastid	49.28	22.37
Zm00001d030701_P001	Maize	extracellular	90.58	21.55
Bra024892.1-P	Field mustard	cytosol	36.23	18.66
KXG34505	Sorghum	plastid	39.86	18.03
KXG37436	Sorghum	plastid	23.19	10.92
EES13034	Sorghum	cytosol	7.97	10.0
EER98053	Sorghum	cytosol	7.97	10.0

Protein Annotations

KEGG:00030+5.3.1.6	KEGG:00051+5.3.1.6	KEGG:00710+5.3.1.6	Gene3D:3.30.70.260	MapMan:35.1	UniProt:A0A1Z5R7F2
GO:GO:0003674	GO:GO:0003824	GO:GO:0004751	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009052	GO:GO:0009987	EnsemblPlants:OQU79375	ProteinID:OQU79375	ProteinID:OQU79375.1	PFAM:PF06026
PANTHER:PTHR43748	PANTHER:PTHR43748:SF2	InterPro:Ribose5P_isomerase_typA	EnsemblPlantsGene:SORBI_3008G135701	SUPFAM:SSF75445	UniParc:UPI000B8BB11E
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:56441451..56442034

Molecular Weight (calculated)

14723.8 Da

IEP (calculated)

6.254

GRAVY (calculated)

0.146

Length

138 amino acids

Sequence
(BLAST)

001: MVEGAGDRFV VIVDESKLVP RLGCTGAVPV EVIPFGASHT LGLIRKVFDG VPGFHARLRT VPAAAKGDGD GSDAPFRTDN GNYIVEMFFE DGIRGDLRDI
101: SDRLLRITGV VEHGMFLGLA TTVIVANKDG TVTVINKK

Best Arabidopsis Sequence Match ( AT1G71100.1 )
(BLAST)

001: MGSAFDPLVT ATEDLAAVNS APPLSNLTQE ELKKIAAYKA VEFVESGMVI GLGTGSTAKH AVARISELLR EGKLKDIIGI PTSTTTHEQA VSLGIPLSDL
101: DSHPVVDLSI DGADEVDPAL NLVKGRGGSL LREKMIEGAS KKFVVIVDES KLVKYIGGSG LAVPVEVVPF CCDFTRGKLE ELFRDSGCVA KLRMKIGSNG
201: EEAAPAVTDN RNYVVDLYLE RDIGDLEVAS EAILRFPGVV EHGMFLGMAT TLIVAGKFGV TVKDRFG

Arabidopsis Description

RPI1Probable ribose-5-phosphate isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C998]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.