Factsheet for Bra014328.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40387	Canola	cytosol	100.0	100.0
AT2G01290.1	Thale cress	cytosol	86.89	87.55
Bra024892.1-P	Field mustard	cytosol	76.4	76.12
Bra007961.1-P	Field mustard	cytosol	68.91	71.04
KRH35797	Soybean	cytosol, mitochondrion	69.29	69.55
VIT_01s0011g04630.t01	Wine grape	cytosol	69.29	68.77
KRG90972	Soybean	cytosol	67.79	68.3
PGSC0003DMT400015282	Potato	cytosol	66.29	66.54
PGSC0003DMT400078358	Potato	cytosol, plastid	64.79	64.55
Solyc05g008370.1.1	Tomato	cytosol	64.79	64.55
VIT_06s0004g03340.t01	Wine grape	plastid	69.29	60.86
GSMUA_Achr3P29130_001	Banana	cytosol, mitochondrion	47.94	60.66
GSMUA_Achr4P11200_001	Banana	cytosol	56.18	58.59
GSMUA_Achr4P06520_001	Banana	cytosol	55.81	57.53
GSMUA_Achr4P03710_001	Banana	plastid	55.81	57.09
EES09254	Sorghum	cytosol	53.93	55.38
TraesCS2D01G271700.1	Wheat	cytosol	50.94	53.12
Bra040120.1-P	Field mustard	plastid	53.18	51.64
Os04t0306400-01	Rice	cytosol	53.18	51.64
Bra040406.1-P	Field mustard	plastid	53.18	51.45
OQU79375	Sorghum	cytosol	25.09	48.55
HORVU2Hr1G066480.1	Barley	plastid	34.83	45.59
Zm00001d052482_P001	Maize	cytosol	16.48	41.51
Zm00001d030701_P001	Maize	extracellular	54.31	25.0
Bra033747.1-P	Field mustard	plastid	25.47	24.03

Protein Annotations

KEGG:00030+5.3.1.6	KEGG:00051+5.3.1.6	KEGG:00710+5.3.1.6	Gene3D:3.30.70.260	Gene3D:3.40.50.1360	MapMan:3.9.2.1
EnsemblPlantsGene:Bra014328	EnsemblPlants:Bra014328.1	EnsemblPlants:Bra014328.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004751
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009052	GO:GO:0009987	UniProt:M4DCW1
HAMAP:MF_00170	InterPro:NagB/RpiA_transferase-like	PFAM:PF06026	PANTHER:PTHR43748	PANTHER:PTHR43748:SF2	InterPro:Ribose5P_isomerase_typA
InterPro:Ribose5P_isomerase_typA_subgr	SUPFAM:SSF100950	SUPFAM:SSF75445	TIGRFAMs:TIGR00021	UniParc:UPI0002545BDA	:

Description

AT2G01290 (E=9e-132) | ribose-5-phosphate isomerase

Coordinates

chrA08:-:1584406..1585209

Molecular Weight (calculated)

28642.0 Da

IEP (calculated)

5.670

GRAVY (calculated)

0.058

Length

267 amino acids

Sequence
(BLAST)

001: MALAYDPLFI TSDKSSMDVP STPPPMVLTQ DELKRIAAYK AVDFVESGMV LGLGTGSTAK HAVARIGELL RQGKLSNIVG IPTSKKTQEQ ALSLGIPLSD
101: LDAHPVIDLS IDGADEVDPH LNLVKGRGGS LLREKMIEGA SKKFVVIVDE TKMVKHIGGS KLALPVEVVP FCWKFTAEKL REVMEGYGCE AKLRLGGEEG
201: KAFVTDNGNY IVDMYLEKDM GDLGAVSDAI LRLPGVVEHG MFLDMASTVI VAGELGVKIK NKHSSCC

Best Arabidopsis Sequence Match ( AT2G01290.1 )
(BLAST)

001: MALAYDPLFI TSDKSLSAFD VASSPPQPMN LTQDELKRIA AYKAVEFVES GMVLGLGTGS TAKHAVDRIG ELLRQGKLEN IVGIPTSKKT QEQALSLGIP
101: LSDLDAHPVI DLSIDGADEV DPFLNLVKGR GGSLLREKMI EGASKKFVVI VDDSKMVKHI GGSKLALPVE IVPFCWKFTA EKLRSLLEGY GCEANLRLGE
201: KGKAFVTDNG NYIVDMHVEE DMGDLGAVSD AILRLPGVVE HGMFLDMAST VIIAGELGVK IKNKH

Arabidopsis Description

RPI2Probable ribose-5-phosphate isomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.