Factsheet for TraesCS2D01G271700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79375	Sorghum	cytosol	41.41	76.81
HORVU2Hr1G066480.1	Barley	plastid	60.16	75.49
Os04t0306400-01	Rice	cytosol	79.3	73.82
GSMUA_Achr3P29130_001	Banana	cytosol, mitochondrion	53.91	65.4
GSMUA_Achr4P11200_001	Banana	cytosol	60.55	60.55
GSMUA_Achr4P03710_001	Banana	plastid	60.94	59.77
GSMUA_Achr4P06520_001	Banana	cytosol	58.98	58.3
CDY09514	Canola	cytosol	52.34	51.74
KRH35797	Soybean	cytosol, mitochondrion	53.52	51.5
Bra007961.1-P	Field mustard	cytosol	51.95	51.35
CDY03702	Canola	cytosol	51.95	51.35
CDY37370	Canola	cytosol	53.52	51.31
CDY40387	Canola	cytosol	53.12	50.94
Bra014328.1-P	Field mustard	cytosol	53.12	50.94
KRG90972	Soybean	cytosol	52.34	50.57
AT1G71100.1	Thale cress	cytosol	52.73	50.56
CDX77814	Canola	cytosol	52.34	50.38
AT2G01290.1	Thale cress	cytosol	51.95	50.19
VIT_01s0011g04630.t01	Wine grape	cytosol	52.34	49.81
PGSC0003DMT400015282	Potato	cytosol	51.17	49.25
PGSC0003DMT400078358	Potato	cytosol, plastid	49.61	47.39
Solyc05g008370.1.1	Tomato	cytosol	49.61	47.39
CDY17683	Canola	cytosol	51.95	46.34
TraesCS6D01G061600.2	Wheat	plastid	48.05	44.57
TraesCS2D01G238600.2	Wheat	mitochondrion, plastid	48.05	44.09
Bra024892.1-P	Field mustard	cytosol	46.09	44.03
VIT_06s0004g03340.t01	Wine grape	plastid	51.95	43.75
Zm00001d030701_P001	Maize	extracellular	78.12	34.48
TraesCS5D01G424700.1	Wheat	plastid	26.56	22.74
TraesCS5D01G424600.1	Wheat	mitochondrion	9.77	21.74
TraesCS2D01G492300.1	Wheat	cytosol	6.25	14.55
TraesCS7D01G377100.1	Wheat	cytosol	6.25	14.55

Protein Annotations

KEGG:00030+5.3.1.6	KEGG:00051+5.3.1.6	KEGG:00710+5.3.1.6	Gene3D:3.30.70.260	Gene3D:3.40.50.1360	MapMan:3.9.2.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004751	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009052	GO:GO:0009987	HAMAP:MF_00170	InterPro:NagB/RpiA_transferase-like	PFAM:PF06026	PANTHER:PTHR43748
PANTHER:PTHR43748:SF2	InterPro:Ribose5P_isomerase_typA	InterPro:Ribose5P_isomerase_typA_subgr	SUPFAM:SSF100950	SUPFAM:SSF75445	TIGRFAMs:TIGR00021
EnsemblPlantsGene:TraesCS2D01G271700	EnsemblPlants:TraesCS2D01G271700.1	TIGR:cd01398	SEG:seg	:	:

Description

No Description!

Coordinates

chr2D:+:335410324..335411094

Molecular Weight (calculated)

27037.9 Da

IEP (calculated)

7.299

GRAVY (calculated)

0.096

Length

256 amino acids

Sequence
(BLAST)

001: MGSAASPPRA LDAATQEDLK RVSAHRAVDM VESGMTLGLG TGSTAAHALD RLGDLLRTGA LRAVAGVPTS LKTEAHAARV GIPMLALADA AEIHLSIDGA
101: DEVDPDLNLV KGRGGSLLRE KMIEGAGARF VVIVDESKLV PRLGCTGAVP VEVVPFGSAY TLGLIRKVFD KLPGFHARLR TVKSKASDRQ EELFLTDNGN
201: HIVEMFFEDG IHGNLRDISD SLLRITGVVE HGMFLGMATK VIVAKKDGTV AVLSKK

Best Arabidopsis Sequence Match ( AT1G71100.1 )
(BLAST)

001: MGSAFDPLVT ATEDLAAVNS APPLSNLTQE ELKKIAAYKA VEFVESGMVI GLGTGSTAKH AVARISELLR EGKLKDIIGI PTSTTTHEQA VSLGIPLSDL
101: DSHPVVDLSI DGADEVDPAL NLVKGRGGSL LREKMIEGAS KKFVVIVDES KLVKYIGGSG LAVPVEVVPF CCDFTRGKLE ELFRDSGCVA KLRMKIGSNG
201: EEAAPAVTDN RNYVVDLYLE RDIGDLEVAS EAILRFPGVV EHGMFLGMAT TLIVAGKFGV TVKDRFG

Arabidopsis Description

RPI1Probable ribose-5-phosphate isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C998]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.