CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77814	Canola	cytosol	85.02	91.73
CDY40387	Canola	cytosol	82.23	88.39
CDY37370	Canola	cytosol	81.88	88.02
Bra024892.1-P	Field mustard	cytosol	79.09	84.7
AT2G01290.1	Thale cress	cytosol	78.05	84.53
VIT_01s0011g04630.t01	Wine grape	cytosol	64.11	68.4
CDY03702	Canola	cytosol	61.67	68.34
CDY09514	Canola	cytosol	60.98	67.57
KRH35797	Soybean	cytosol, mitochondrion	62.37	67.29
KRG90972	Soybean	cytosol	61.32	66.42
PGSC0003DMT400015282	Potato	cytosol	60.63	65.41
Solyc05g008370.1.1	Tomato	cytosol	60.98	65.3
PGSC0003DMT400078358	Potato	cytosol, plastid	60.98	65.3
GSMUA_Achr3P29130_001	Banana	cytosol, mitochondrion	45.99	62.56
VIT_06s0004g03340.t01	Wine grape	plastid	64.46	60.86
GSMUA_Achr4P03710_001	Banana	plastid	52.61	57.85
GSMUA_Achr4P11200_001	Banana	cytosol	51.57	57.81
GSMUA_Achr4P06520_001	Banana	cytosol	50.17	55.6
EES09254	Sorghum	cytosol	48.78	53.85
TraesCS2D01G271700.1	Wheat	cytosol	46.34	51.95
CDY21110	Canola	plastid	48.78	50.91
CDY30018	Canola	plastid	48.78	50.72
CDY41900	Canola	plastid	48.43	50.55
Os04t0306400-01	Rice	cytosol	48.43	50.55
CDY50757	Canola	plastid	48.43	50.36
OQU79375	Sorghum	cytosol	23.34	48.55
HORVU2Hr1G066480.1	Barley	plastid	31.01	43.63
Zm00001d052482_P001	Maize	cytosol	14.63	39.62
Zm00001d030701_P001	Maize	extracellular	48.78	24.14
CDY49016	Canola	plastid	22.3	22.61
CDY66019	Canola	cytosol	8.01	20.91
CDY29709	Canola	cytosol	8.01	20.91
CDY10254	Canola	cytosol	8.01	20.91
CDY06683	Canola	cytosol	8.01	20.91
CDX96931	Canola	cytosol	8.01	20.91
CDY49497	Canola	plastid	21.25	20.82
CDY21109	Canola	cytosol	11.85	13.03

Protein Annotations

KEGG:00030+5.3.1.6	KEGG:00051+5.3.1.6	KEGG:00710+5.3.1.6	Gene3D:3.30.70.260	Gene3D:3.40.50.1360	MapMan:3.9.2.1
GO:A0A078FZC2	UniProt:A0A078FZC2	EnsemblPlants:CDY17683	ProteinID:CDY17683	ProteinID:CDY17683.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004751	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009052
GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00001903001	HAMAP:MF_00170	InterPro:NagB/RpiA_transferase-like	PFAM:PF06026	PANTHER:PTHR43748
PANTHER:PTHR43748:SF2	MetaCyc:PWY-1861	MetaCyc:PWY-5723	InterPro:Ribose5P_isomerase_typA	InterPro:Ribose5P_isomerase_typA_subgr	SUPFAM:SSF100950
SUPFAM:SSF75445	TIGRFAMs:TIGR00021	UniPathway:UPA00115	UniParc:UPI0004EDFE22	SEG:seg	:

Description

BnaA06g35020DBnaA06g35020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZC2]

Coordinates

chrLK032076:+:573931..574794

Molecular Weight (calculated)

31618.6 Da

IEP (calculated)

6.059

GRAVY (calculated)

0.030

Length

287 amino acids

Sequence
(BLAST)

001: MARAYDPLFI TSDNSPIDVP SPSSSSSMTL TKDELKRIAA YKAVDFVKSN MVLGLGTGST AKHAVDRIGE LLRQGKLVNI VGIPTSKKTQ EQALSLNIPL
101: SDLDAHPVVD LSIDGADEVD PCLNLVKGRG GSLLREKMIE GASKKFVVIV DESKMVKHIG GSKMALPVEI VPFCWKFTAE RLRRVMEGYG CEAKLRLGGE
201: KGEAFVTDNG NYIVDMYLEK DMGDLRVVSD EILRLPGVVE HGMFLDMAST VIIAGELGVK IKNKHISCIF LFFFWWVLGE REDYYAL

Best Arabidopsis Sequence Match ( AT2G01290.1 )
(BLAST)

001: MALAYDPLFI TSDKSLSAFD VASSPPQPMN LTQDELKRIA AYKAVEFVES GMVLGLGTGS TAKHAVDRIG ELLRQGKLEN IVGIPTSKKT QEQALSLGIP
101: LSDLDAHPVI DLSIDGADEV DPFLNLVKGR GGSLLREKMI EGASKKFVVI VDDSKMVKHI GGSKLALPVE IVPFCWKFTA EKLRSLLEGY GCEANLRLGE
201: KGKAFVTDNG NYIVDMHVEE DMGDLGAVSD AILRLPGVVE HGMFLDMAST VIIAGELGVK IKNKH

Arabidopsis Description

RPI2Probable ribose-5-phosphate isomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.