CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49016	Canola	plastid	90.44	93.64
Bra033747.1-P	Field mustard	plastid	88.74	91.87
AT5G44520.2	Thale cress	cytosol, plastid	71.67	64.42
VIT_10s0092g00090.t01	Wine grape	cytosol	49.49	63.32
KRH36898	Soybean	cytosol	20.48	59.41
GSMUA_Achr9P10110_001	Banana	mitochondrion	46.08	58.19
KRH11874	Soybean	plastid	53.92	54.3
Solyc02g069620.2.1	Tomato	plastid	50.17	49.66
Os03t0781400-01	Rice	plastid	47.78	46.82
TraesCS5B01G419300.1	Wheat	plastid	46.42	45.79
KXG37436	Sorghum	plastid	45.05	45.05
TraesCS5D01G424700.1	Wheat	plastid	45.73	44.82
TraesCS5A01G417000.1	Wheat	plastid	45.39	44.78
PGSC0003DMT400054453	Potato	plastid	47.44	42.9
Zm00001d013135_P002	Maize	plastid	44.03	40.19
CDY09514	Canola	cytosol	22.53	25.48
CDY03702	Canola	cytosol	22.18	25.1
CDY40387	Canola	cytosol	22.53	24.72
CDY37370	Canola	cytosol	22.53	24.72
CDY41900	Canola	plastid	21.84	23.27
CDY21110	Canola	plastid	21.84	23.27
CDX77814	Canola	cytosol	20.82	22.93
CDY50757	Canola	plastid	21.5	22.83
CDY30018	Canola	plastid	21.5	22.83
CDY17683	Canola	cytosol	20.82	21.25
CDY66019	Canola	cytosol	5.12	13.64
CDY29709	Canola	cytosol	5.12	13.64
CDY10254	Canola	cytosol	5.12	13.64
CDY06683	Canola	cytosol	5.12	13.64
CDX96931	Canola	cytosol	5.12	13.64
CDY21109	Canola	cytosol	8.19	9.2

Protein Annotations

KEGG:00030+5.3.1.6	KEGG:00051+5.3.1.6	KEGG:00710+5.3.1.6	Gene3D:3.30.70.260	Gene3D:3.40.50.1360	MapMan:35.1
GO:A0A078IHR4	UniProt:A0A078IHR4	EnsemblPlants:CDY49497	ProteinID:CDY49497	ProteinID:CDY49497.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004751	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009052
GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00093164001	InterPro:NagB/RpiA_transferase-like	PFAM:PF06026	PANTHER:PTHR43748	PANTHER:PTHR43748:SF1
MetaCyc:PWY-1861	MetaCyc:PWY-5723	InterPro:Ribose5P_isomerase_typA	SUPFAM:SSF100950	SUPFAM:SSF75445	UniPathway:UPA00115
UniParc:UPI0004EED6F8	:	:	:	:	:

Description

BnaC07g18020DBnaC07g18020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHR4]

Coordinates

chrLK032836:+:105817..107577

Molecular Weight (calculated)

31313.2 Da

IEP (calculated)

4.795

GRAVY (calculated)

0.074

Length

293 amino acids

Sequence
(BLAST)

001: MVVAAAAAST PFSLSSAVFT RRRSFRVSAT LSREPSPLLR AAQHTVDSYV ESGMVVGLGS GEASDLAIRY LGHQLRSGSI QGVVGVPMSA RSASEAAKYG
101: VPLKHFRDDF QIDFAFHDAD AVEEGTLVSV IGRRTSTTQE DDYILLQKAK RFTMQSIVKA ADEAVFLIKD EQYKSGLEGS IPVLVQSLNW LAVAEEIDDL
201: YLGDAEVWRR ASVGDAGPLG GDFPIVTSDG HNILDVIFTT PIPSLANVAK SLDNIDGVVD HGLVMKNRCT VVIAGETEVR TVTLQTSAVE GGV

Best Arabidopsis Sequence Match ( AT5G44520.2 )
(BLAST)

001: MHHKTDREIR AVKTTESRLS DSNRSSHTKK MVTATASTPF SLSSSVVFTR RRNFKRFPVC ASLSPEVSPL LRAAHHTVDN YVKSGMIIGL GSGEASDFAI
101: RYLGQQLGSG SLHNVVGVPM SARSASEAAK YGIPLEYYRD GVQIDFAFHD ADAVEENTLI AVIGRRRSSQ EDDYILKQKS IVKVADEAVF MIKEEQYKAG
201: LEGSIPVLVQ SLNWLAIAEE IDDLYLGDAE VWRRASVENE GPLGGDFPIV TSDGHNILDV IFTTPIRSLA DLATSLDKID GVVDHGLIIK TRCTVVIAEE
301: TVVRSVTLQT SALEGGVRTY GQTLQK

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:TAIR;Acc:AT5G44520]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.