Factsheet for Bra033747.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49016	Canola	plastid	96.82	96.82
CDY49497	Canola	plastid	91.87	88.74
AT5G44520.2	Thale cress	cytosol, plastid	73.85	64.11
VIT_10s0092g00090.t01	Wine grape	cytosol	50.53	62.45
GSMUA_Achr9P10110_001	Banana	mitochondrion	48.06	58.62
KRH36898	Soybean	cytosol	20.14	56.44
KRH11874	Soybean	plastid	54.42	52.92
Solyc02g069620.2.1	Tomato	plastid	50.88	48.65
Os03t0781400-01	Rice	plastid	48.06	45.48
TraesCS5B01G419300.1	Wheat	plastid	47.7	45.45
TraesCS5D01G424700.1	Wheat	plastid	46.64	44.15
KXG37436	Sorghum	plastid	45.58	44.03
TraesCS5A01G417000.1	Wheat	plastid	45.94	43.77
PGSC0003DMT400054453	Potato	plastid	47.7	41.67
Zm00001d013135_P002	Maize	plastid	45.23	39.88
Bra007961.1-P	Field mustard	cytosol	24.38	26.64
Bra014328.1-P	Field mustard	cytosol	24.03	25.47
Bra040120.1-P	Field mustard	plastid	23.32	24.0
Bra040406.1-P	Field mustard	plastid	22.97	23.55
Bra024892.1-P	Field mustard	cytosol	21.91	23.13

Protein Annotations

KEGG:00030+5.3.1.6	KEGG:00051+5.3.1.6	KEGG:00710+5.3.1.6	Gene3D:3.30.70.260	Gene3D:3.40.50.1360	MapMan:35.1
EnsemblPlantsGene:Bra033747	EnsemblPlants:Bra033747.1	EnsemblPlants:Bra033747.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004751
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009052	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	UniProt:M4EY56
InterPro:NagB/RpiA_transferase-like	PFAM:PF06026	PANTHER:PTHR43748	PANTHER:PTHR43748:SF1	InterPro:Ribose5P_isomerase_typA	SUPFAM:SSF100950
SUPFAM:SSF75445	UniParc:UPI000253F640	:	:	:	:

Description

AT5G44520 (E=1e-124) | ribose 5-phosphate isomerase-related

Coordinates

chrA06:+:25280956..25282519

Molecular Weight (calculated)

30476.2 Da

IEP (calculated)

4.825

GRAVY (calculated)

0.063

Length

283 amino acids

Sequence
(BLAST)

001: MLVAAASTPF SLSFAVFTRS RSFRVSATLS REPSPLLRAA HHTVDSYVKS GMVVGLGSGE ASDLAIRYLG HQLRSGSVQD VVGVPMSARS ASEAAKYGVP
101: LKHFRDDFQI DFAFHDADAV EEGTLVSVIG RRRTTEEDDY ILRQKSIVKA ADEAVFMVKE ELYKSGLEGS IPVLVQSLNW LAIAEEIDDL YLGEAEVWRR
201: ASVGDAGPLG GDFPIVTSDG HNILDVIFTT PIPSLGNVAK SLDNIDGVVD HGLVIKTRCT VVIAGEREVR TVTLQTSAVE DGV

Best Arabidopsis Sequence Match ( AT5G44520.2 )
(BLAST)

001: MHHKTDREIR AVKTTESRLS DSNRSSHTKK MVTATASTPF SLSSSVVFTR RRNFKRFPVC ASLSPEVSPL LRAAHHTVDN YVKSGMIIGL GSGEASDFAI
101: RYLGQQLGSG SLHNVVGVPM SARSASEAAK YGIPLEYYRD GVQIDFAFHD ADAVEENTLI AVIGRRRSSQ EDDYILKQKS IVKVADEAVF MIKEEQYKAG
201: LEGSIPVLVQ SLNWLAIAEE IDDLYLGDAE VWRRASVENE GPLGGDFPIV TSDGHNILDV IFTTPIRSLA DLATSLDKID GVVDHGLIIK TRCTVVIAEE
301: TVVRSVTLQT SALEGGVRTY GQTLQK

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:TAIR;Acc:AT5G44520]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.