Factsheet for Bra024892.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77814	Canola	cytosol	79.48	80.08
CDY17683	Canola	cytosol	84.7	79.09
Bra014328.1-P	Field mustard	cytosol	76.12	76.4
AT2G01290.1	Thale cress	cytosol	72.39	73.21
Bra007961.1-P	Field mustard	cytosol	59.7	61.78
VIT_01s0011g04630.t01	Wine grape	cytosol	60.82	60.59
KRH35797	Soybean	cytosol, mitochondrion	58.58	59.02
Solyc05g008370.1.1	Tomato	cytosol	58.21	58.21
PGSC0003DMT400078358	Potato	cytosol, plastid	58.21	58.21
KRG90972	Soybean	cytosol	57.46	58.11
PGSC0003DMT400015282	Potato	cytosol	57.09	57.52
GSMUA_Achr3P29130_001	Banana	cytosol, mitochondrion	43.66	55.45
VIT_06s0004g03340.t01	Wine grape	plastid	60.82	53.62
GSMUA_Achr4P03710_001	Banana	plastid	50.0	51.34
GSMUA_Achr4P11200_001	Banana	cytosol	48.88	51.17
GSMUA_Achr4P06520_001	Banana	cytosol	47.01	48.65
EES09254	Sorghum	cytosol	47.01	48.46
Os04t0306400-01	Rice	cytosol	47.76	46.55
TraesCS2D01G271700.1	Wheat	cytosol	44.03	46.09
Bra040120.1-P	Field mustard	plastid	46.27	45.09
Bra040406.1-P	Field mustard	plastid	46.27	44.93
Zm00001d052482_P001	Maize	cytosol	15.3	38.68
HORVU2Hr1G066480.1	Barley	plastid	27.61	36.27
OQU79375	Sorghum	cytosol	18.66	36.23
Bra033747.1-P	Field mustard	plastid	23.13	21.91
Zm00001d030701_P001	Maize	extracellular	47.01	21.72

Protein Annotations

KEGG:00030+5.3.1.6	KEGG:00051+5.3.1.6	KEGG:00710+5.3.1.6	Gene3D:3.30.70.260	Gene3D:3.40.50.1360	MapMan:3.9.2.1
EnsemblPlantsGene:Bra024892	EnsemblPlants:Bra024892.1	EnsemblPlants:Bra024892.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004751
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009052	GO:GO:0009987	UniProt:M4E7Y6
InterPro:NagB/RpiA_transferase-like	PFAM:PF06026	PANTHER:PTHR43748	PANTHER:PTHR43748:SF2	InterPro:Ribose5P_isomerase_typA	SUPFAM:SSF100950
SUPFAM:SSF75445	TIGRFAMs:TIGR00021	UniParc:UPI000253F9AE	SEG:seg	:	:

Description

AT2G01290 (E=1e-101) | ribose-5-phosphate isomerase

Coordinates

chrA06:+:24147189..24148733

Molecular Weight (calculated)

29364.6 Da

IEP (calculated)

5.777

GRAVY (calculated)

-0.110

Length

268 amino acids

Sequence
(BLAST)

001: MARAYDPLFI TSDNSPIDVP SPSSSSMTLT KDELKRIAAY KAVDFVKSNM VLGLGTGSTA KHAVDRIGEL LRQGKLENIV GIPTSKKTQE HALSLNIPLS
101: DLDAHPVVDL SIDGADEVDP RLNLVKGRGG SLLREKMIEG ASKKFVVIVD ESKMVKHIGG SKMALPVEIV PFCWKFTAER LRRVMEGYGC EAKLRLGGEK
201: GEAFVTDNGN YIVDMYLEKD MGDLSVVSIT IGFDAGVLSC MEYMKAAPWF EDEEYKTGSC CLSYILKK

Best Arabidopsis Sequence Match ( AT2G01290.1 )
(BLAST)

001: MALAYDPLFI TSDKSLSAFD VASSPPQPMN LTQDELKRIA AYKAVEFVES GMVLGLGTGS TAKHAVDRIG ELLRQGKLEN IVGIPTSKKT QEQALSLGIP
101: LSDLDAHPVI DLSIDGADEV DPFLNLVKGR GGSLLREKMI EGASKKFVVI VDDSKMVKHI GGSKLALPVE IVPFCWKFTA EKLRSLLEGY GCEANLRLGE
201: KGKAFVTDNG NYIVDMHVEE DMGDLGAVSD AILRLPGVVE HGMFLDMAST VIIAGELGVK IKNKH

Arabidopsis Description

RPI2Probable ribose-5-phosphate isomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.