CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36898	Soybean	cytosol	29.9	86.14
VIT_10s0092g00090.t01	Wine grape	cytosol	59.79	75.98
GSMUA_Achr9P10110_001	Banana	mitochondrion	53.61	67.24
Solyc02g069620.2.1	Tomato	plastid	58.76	57.77
CDY49016	Canola	plastid	54.64	56.18
Bra033747.1-P	Field mustard	plastid	52.92	54.42
CDY49497	Canola	plastid	54.3	53.92
Os03t0781400-01	Rice	plastid	52.23	50.84
TraesCS5B01G419300.1	Wheat	plastid	51.55	50.51
TraesCS5A01G417000.1	Wheat	plastid	51.2	50.17
PGSC0003DMT400054453	Potato	plastid	55.67	50.0
TraesCS5D01G424700.1	Wheat	plastid	50.52	49.16
KXG37436	Sorghum	plastid	49.14	48.81
AT5G44520.2	Thale cress	cytosol, plastid	53.26	47.55
Zm00001d013135_P002	Maize	plastid	50.17	45.48
KRG90972	Soybean	cytosol	24.74	27.17
KRH35797	Soybean	cytosol, mitochondrion	24.74	27.07
KRH44502	Soybean	plastid	15.46	24.46
KRH68720	Soybean	nucleus, plastid	22.68	23.49
KRG96958	Soybean	plastid	22.34	23.13
KRH30286	Soybean	cytosol, nucleus	4.47	11.82
KRG98270	Soybean	cytosol	4.47	11.82

Protein Annotations

KEGG:00030+5.3.1.6	KEGG:00051+5.3.1.6	KEGG:00710+5.3.1.6	EntrezGene:100783936	Gene3D:3.30.70.260	Gene3D:3.40.50.1360
MapMan:35.1	EMBL:ACUP02009243	EnsemblPlantsGene:GLYMA_15G136200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004751
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009052	GO:GO:0009987	UniProt:I1MGA3
EnsemblPlants:KRH11874	ProteinID:KRH11874	ProteinID:KRH11874.1	InterPro:NagB/RpiA_transferase-like	PFAM:PF06026	PANTHER:PTHR43748
PANTHER:PTHR43748:SF1	MetaCyc:PWY-1861	MetaCyc:PWY-5723	InterPro:Ribose5P_isomerase_typA	SUPFAM:SSF100950	SUPFAM:SSF75445
UniParc:UPI0001CABFDA	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:11005023..11010142

Molecular Weight (calculated)

31017.3 Da

IEP (calculated)

5.337

GRAVY (calculated)

0.114

Length

291 amino acids

Sequence
(BLAST)

001: MASVASSSSF STRLLLHSHT PLVCRRRCRP NFLRMVTRSC LDDSSALLRA AQHTVDTYVK SGMVVGLGSG HASGMAIQHL GSQLRTGNLK DIVGIPMSVS
101: SASEAAKAGI PLDTYQGSSQ IDFAFDDADV IEEGTLVAII GRRKLQGGES IIQEKSIINS ANKCVFIIEE NQYKGGLEGS IPVLIQSLNW MTIAEEIDDM
201: FLGDAEVWRR PSIGQAGPLG GDFPVVTKEG HNILDVIFTS PIENLAEVAK SLDKVDGVVD HGVVSKIPCT VVIASQTGLN ILDKLTADIV G

Best Arabidopsis Sequence Match ( AT5G44520.2 )
(BLAST)

001: MHHKTDREIR AVKTTESRLS DSNRSSHTKK MVTATASTPF SLSSSVVFTR RRNFKRFPVC ASLSPEVSPL LRAAHHTVDN YVKSGMIIGL GSGEASDFAI
101: RYLGQQLGSG SLHNVVGVPM SARSASEAAK YGIPLEYYRD GVQIDFAFHD ADAVEENTLI AVIGRRRSSQ EDDYILKQKS IVKVADEAVF MIKEEQYKAG
201: LEGSIPVLVQ SLNWLAIAEE IDDLYLGDAE VWRRASVENE GPLGGDFPIV TSDGHNILDV IFTTPIRSLA DLATSLDKID GVVDHGLIIK TRCTVVIAEE
301: TVVRSVTLQT SALEGGVRTY GQTLQK

Arabidopsis Description

NagB/RpiA/CoA transferase-like superfamily protein [Source:TAIR;Acc:AT5G44520]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.