Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G08710.1 | Thale cress | cytosol | 92.86 | 92.86 |
| CDY35999 | Canola | cytosol | 92.14 | 92.14 |
| CDY58647 | Canola | cytosol | 89.29 | 89.29 |
| Bra001346.1-P | Field mustard | cytosol | 100.0 | 85.37 |
| CDY22165 | Canola | cytosol | 87.14 | 83.56 |
| VIT_08s0040g00020.t01 | Wine grape | cytosol | 73.57 | 74.1 |
| KRH00477 | Soybean | cytosol | 73.57 | 74.1 |
| KRH09556 | Soybean | cytosol | 67.14 | 68.61 |
| Os01t0168200-01 | Rice | plasma membrane | 63.57 | 67.94 |
| PGSC0003DMT400076843 | Potato | cytosol | 38.57 | 65.85 |
| TraesCS1D01G114000.1 | Wheat | cytosol | 60.71 | 64.89 |
| TraesCS1B01G132600.1 | Wheat | cytosol | 60.71 | 64.89 |
| TraesCS1A01G112400.1 | Wheat | cytosol | 60.71 | 64.89 |
| Zm00001d037499_P001 | Maize | cytosol | 61.43 | 64.66 |
| Solyc09g015820.2.1 | Tomato | plastid | 70.0 | 63.64 |
| Os05t0169000-01 | Rice | cytosol | 58.57 | 62.12 |
| KRH64869 | Soybean | cytosol | 67.86 | 62.09 |
| CDY27984 | Canola | nucleus | 92.14 | 61.14 |
| EES19112 | Sorghum | cytosol | 57.86 | 60.45 |
| GSMUA_Achr5P27870_001 | Banana | cytosol | 60.71 | 60.28 |
| KRH40706 | Soybean | mitochondrion | 71.43 | 59.17 |
| GSMUA_Achr8P01700_001 | Banana | cytosol | 58.57 | 58.99 |
| HORVU1Hr1G024700.4 | Barley | cytosol | 58.57 | 56.16 |
| KXG31771 | Sorghum | cytosol | 60.0 | 56.0 |
| Zm00001d039710_P004 | Maize | cytosol | 57.14 | 55.56 |
| GSMUA_AchrUn_... | Banana | cytosol, plasma membrane, plastid | 56.43 | 47.88 |
| CDY70695 | Canola | cytosol | 40.71 | 41.3 |
| CDY28996 | Canola | cytosol | 33.57 | 41.23 |
| CDX77974 | Canola | cytosol | 33.57 | 41.23 |
| CDX90669 | Canola | cytosol | 33.57 | 41.23 |
| CDX72138 | Canola | mitochondrion | 43.57 | 40.94 |
| CDY27215 | Canola | mitochondrion | 43.57 | 40.94 |
| CDY32015 | Canola | mitochondrion | 43.57 | 40.4 |
| CDX67647 | Canola | mitochondrion | 43.57 | 40.4 |
| CDY67121 | Canola | mitochondrion | 43.57 | 40.13 |
| CDY34470 | Canola | cytosol | 15.71 | 37.93 |
| CDY00656 | Canola | cytosol | 97.14 | 36.46 |
| CDY43592 | Canola | cytosol | 30.71 | 34.96 |
| CDY32970 | Canola | cytosol | 30.71 | 34.96 |
| CDY53958 | Canola | cytosol | 27.86 | 33.33 |
| CDY39355 | Canola | cytosol | 27.86 | 32.77 |
| CDY29406 | Canola | cytosol | 27.86 | 32.77 |
| CDY36029 | Canola | cytosol | 27.14 | 32.2 |
| CDX67442 | Canola | cytosol | 30.71 | 32.09 |
| CDY34646 | Canola | cytosol | 28.57 | 31.75 |
| CDY65333 | Canola | cytosol | 30.0 | 31.58 |
| CDY27290 | Canola | cytosol | 27.86 | 30.47 |
| CDY30901 | Canola | cytosol | 26.43 | 28.91 |
| CDY45144 | Canola | cytosol | 26.43 | 28.91 |
| CDY38768 | Canola | cytosol, plastid | 26.43 | 24.5 |
| CDY11645 | Canola | cytosol, plastid | 26.43 | 24.5 |
| CDY03743 | Canola | extracellular | 15.0 | 24.42 |
| CDY23544 | Canola | cytosol | 24.29 | 22.97 |
| CDY69984 | Canola | plastid | 30.0 | 22.58 |
| CDY38116 | Canola | plastid | 30.0 | 22.46 |
| CDY48388 | Canola | cytosol | 23.57 | 22.45 |
| CDY57101 | Canola | cytosol | 26.43 | 22.42 |
| CDY23543 | Canola | cytosol | 22.14 | 22.14 |
| CDY48387 | Canola | cytosol | 22.14 | 21.99 |
| CDX73752 | Canola | cytosol, mitochondrion | 34.29 | 21.82 |
| CDY04457 | Canola | cytosol | 15.0 | 21.43 |
| CDY37032 | Canola | cytosol | 28.57 | 21.39 |
| CDY53739 | Canola | plastid | 27.14 | 20.99 |
| CDY51539 | Canola | plastid | 25.0 | 19.44 |
| CDY28704 | Canola | plastid | 23.57 | 18.33 |
| CDY11641 | Canola | plastid | 14.29 | 9.66 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | GO:A0A078CAX9 | EnsemblPlants:CDX73940 | ProteinID:CDX73940 | ProteinID:CDX73940.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006662 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:GSBRNA2T00111668001 |
| InterPro:IPR013766 | PFAM:PF00085 | PIRSF:PIRSF000077 | PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 |
| PANTHER:PTHR10438 | PANTHER:PTHR10438:SF267 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS |
| InterPro:Thioredoxin_domain | UniParc:UPI0004EF175E | : | : | : | : |
Description
BnaA03g31070D
Coordinates
chrLK031800:+:627973..629278
Molecular Weight (calculated)
15373.2 Da
IEP (calculated)
4.944
GRAVY (calculated)
-0.234
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSCVSKGKE DDDSIHNVDF SGGNVHLITT KESWDEKLAE AGRDGKIVIA NFSATWCGPC KVVAPFFIEL SEKHPSIMFL LVDVDELSDF SSSWDIKATP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSIL DSVPESPQRP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSIL DSVPESPQRP
001: MGSCVSKGKG DDDSVHNVEF SGGNVHLITT KESWDDKLAE ADRDGKIVVA NFSATWCGPC KIVAPFFIEL SEKHSSLMFL LVDVDELSDF SSSWDIKATP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSII DSVPESPQRP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSII DSVPESPQRP
Arabidopsis Description
TRX9Thioredoxin H9 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Y6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.