Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G08710.1 | EER98924 | AT3G02470.1 | 21798944 |
| AT3G08710.1 | EES05409 | AT3G02470.1 | 21798944 |
| AT3G08710.1 | OQU81878 | AT3G02470.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039710_P004 | Maize | cytosol | 89.33 | 93.06 |
| Os01t0168200-01 | Rice | plasma membrane | 72.0 | 82.44 |
| EES19112 | Sorghum | cytosol | 69.33 | 77.61 |
| GSMUA_Achr5P27870_001 | Banana | cytosol | 66.67 | 70.92 |
| GSMUA_Achr8P01700_001 | Banana | cytosol | 58.67 | 63.31 |
| VIT_08s0040g00020.t01 | Wine grape | cytosol | 58.67 | 63.31 |
| PGSC0003DMT400076843 | Potato | cytosol | 34.0 | 62.2 |
| CDX73940 | Canola | cytosol | 56.0 | 60.0 |
| CDY58647 | Canola | cytosol | 56.0 | 60.0 |
| Bra040055.1-P | Field mustard | cytosol | 54.67 | 59.85 |
| AT3G08710.1 | Thale cress | cytosol | 55.33 | 59.29 |
| CDY35999 | Canola | cytosol | 55.33 | 59.29 |
| KRH00477 | Soybean | cytosol | 54.67 | 58.99 |
| KRH09556 | Soybean | cytosol | 52.0 | 56.93 |
| Solyc09g015820.2.1 | Tomato | plastid | 58.0 | 56.49 |
| CDY22165 | Canola | cytosol | 54.0 | 55.48 |
| GSMUA_AchrUn_... | Banana | cytosol, plasma membrane, plastid | 57.33 | 52.12 |
| KRH64869 | Soybean | cytosol | 52.67 | 51.63 |
| Bra001346.1-P | Field mustard | cytosol | 56.0 | 51.22 |
| KRH40706 | Soybean | mitochondrion | 54.67 | 48.52 |
| PGSC0003DMT400059108 | Potato | cytosol | 44.67 | 48.2 |
| Solyc03g095500.2.1 | Tomato | cytosol | 43.33 | 46.76 |
| Bra014691.1-P | Field mustard | cytosol, mitochondrion | 39.33 | 44.03 |
| OQU88584 | Sorghum | cytosol | 34.0 | 43.22 |
| Bra007245.1-P | Field mustard | plastid | 40.0 | 42.86 |
| CDY70695 | Canola | cytosol | 39.33 | 42.75 |
| CDX67647 | Canola | mitochondrion | 42.67 | 42.38 |
| CDY32015 | Canola | mitochondrion | 42.67 | 42.38 |
| EES19700 | Sorghum | cytosol | 36.67 | 42.31 |
| AT2G40790.1 | Thale cress | cytosol | 42.0 | 40.91 |
| AT3G56420.2 | Thale cress | mitochondrion | 42.0 | 40.91 |
| CDY67121 | Canola | mitochondrion | 41.33 | 40.79 |
| CDY27215 | Canola | mitochondrion | 40.0 | 40.27 |
| CDX72138 | Canola | mitochondrion | 40.0 | 40.27 |
| CDY27984 | Canola | nucleus | 55.33 | 39.34 |
| KXG34558 | Sorghum | cytosol | 30.0 | 36.59 |
| EER90722 | Sorghum | cytosol | 32.0 | 36.09 |
| OQU78269 | Sorghum | cytosol | 30.0 | 35.71 |
| OQU82388 | Sorghum | cytosol | 30.0 | 34.88 |
| EER98090 | Sorghum | cytosol | 25.33 | 33.63 |
| CDY00656 | Canola | cytosol | 58.0 | 23.32 |
| KXG21303 | Sorghum | plastid | 26.0 | 20.31 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | UniProt:A0A1B6Q1K5 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006662 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0045454 | GO:GO:0055114 | InterPro:IPR013766 | EnsemblPlants:KXG31771 | ProteinID:KXG31771 |
| ProteinID:KXG31771.1 | PFAM:PF00085 | PIRSF:PIRSF000077 | PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 |
| PANTHER:PTHR10438 | PANTHER:PTHR10438:SF267 | EnsemblPlantsGene:SORBI_3003G054200 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI0001C80A14 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:+:4898330..4900284
Molecular Weight (calculated)
16388.5 Da
IEP (calculated)
4.940
GRAVY (calculated)
-0.162
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLKRLMTCC CCIAKQHADD EDKIDFGGGN VHVVTSKEDW DQKIAEANKD GKIVVANFSA SWCGPCRVIS PVYAEMSQTY PQLMFLTIDV DELMEFSSSW
101: DIRATPTFFF LKNGQQVDKL VGANKPELEK KVAAIAGASS QADAASSKTV
101: DIRATPTFFF LKNGQQVDKL VGANKPELEK KVAAIAGASS QADAASSKTV
001: MGSCVSKGKG DDDSVHNVEF SGGNVHLITT KESWDDKLAE ADRDGKIVVA NFSATWCGPC KIVAPFFIEL SEKHSSLMFL LVDVDELSDF SSSWDIKATP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSII DSVPESPQRP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSII DSVPESPQRP
Arabidopsis Description
TRX9Thioredoxin H9 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Y6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.