Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG34558 | Sorghum | cytosol | 60.18 | 55.28 |
| Zm00001d019035_P001 | Maize | cytosol | 61.06 | 54.76 |
| OQU88584 | Sorghum | cytosol | 55.75 | 53.39 |
| Os07t0186000-02 | Rice | extracellular | 55.75 | 51.64 |
| TraesCS2A01G243200.1 | Wheat | cytosol, golgi, plastid | 49.56 | 47.46 |
| TraesCS2B01G260500.1 | Wheat | extracellular | 33.63 | 40.0 |
| TraesCS2D01G244400.1 | Wheat | cytosol | 47.79 | 39.71 |
| OQU78269 | Sorghum | cytosol | 44.25 | 39.68 |
| EES19112 | Sorghum | cytosol | 33.63 | 28.36 |
| EER90722 | Sorghum | cytosol | 31.86 | 27.07 |
| EES19700 | Sorghum | cytosol | 30.09 | 26.15 |
| Os12t0280050-00 | Rice | cytosol | 28.32 | 26.02 |
| KXG31771 | Sorghum | cytosol | 33.63 | 25.33 |
| OQU82388 | Sorghum | cytosol | 28.32 | 24.81 |
| KXG21303 | Sorghum | plastid | 29.2 | 17.19 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | UniProt:C5XB73 | EnsemblPlants:EER98090 | ProteinID:EER98090 | ProteinID:EER98090.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006662 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0015035 | GO:GO:0016671 | GO:GO:0019725 | GO:GO:0034599 | GO:GO:0045454 | GO:GO:0047134 |
| GO:GO:0055114 | GO:GO:0098869 | InterPro:IPR013766 | PFAM:PF00085 | PIRSF:PIRSF000077 | PFscan:PS51352 |
| PANTHER:PTHR10438 | PANTHER:PTHR10438:SF293 | EnsemblPlantsGene:SORBI_3002G058000 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_domain | UniParc:UPI0001A842BE | RefSeq:XP_002461569.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:5619813..5620921
Molecular Weight (calculated)
12914.1 Da
IEP (calculated)
3.989
GRAVY (calculated)
-0.217
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAEGTVIA CHTNEEFDAQ MDEAYEAGKL VIIDFMTTWC PFCQEIAPVY KEYANKYPAA VFLEVDAEEL EDVAKKYNIH SFPTFFFIRN GETLESFVGA
101: DPEKLEETIN KYY
101: DPEKLEETIN KYY
001: MAAEEGQVIG CHTNDVWTVQ LDKAKESNKL IVIDFTASWC PPCRMIAPIF NDLAKKFMSS AIFFKVDVDE LQSVAKEFGV EAMPTFVFIK AGEVVDKLVG
101: ANKEDLQAKI VKHTGVTTA
101: ANKEDLQAKI VKHTGVTTA
Arabidopsis Description
TRX4Thioredoxin H4 [Source:UniProtKB/Swiss-Prot;Acc:Q39239]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.